XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAGGCCCAT
ACCTAAACATGATAAAAGCAATCTACAGCAAACCAGTAGCCAACATCAAA
GTAAATGGTGAGAAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGACA
AGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACTTGAAGTATTAG
CCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAA
GAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATATAAG
TGACCCTAAAAATTCTACCAGAGAACTCCTAAACCTGATAAACAGCTTCG
GTGAAGTAGCTGGATATAAAATAAACTCAAACAAGTCAATGGCCTTTCTC
TATACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTT
CTCAATAGTCACAAATAATATAAAATATCTTGGCGTGACTCTAACTAAGG
AAGTGAAAGATCTGTATGATAAAAACTTCAAATCTCTGAAGAAAGAAATT
AAGTAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAG
GATTAATATAGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCA
ATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTGGAAGGA
GCAATTTGCAAATTTGTCTGGAATACCAACAACCTAGGATAGCAAAAAGC
TTCTCCAGGAAAAAGAACTN

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACTACATTTGTCTTGAACTTTAGCCCTT
TCCTGTCTCCCATTCTCCACATTCCTTTTATTGAAGTTGAACAGCATCTT
CTTAGTTTGCTAATTGATTGTCTAGACTGTTCCTTCATCTGAACACTGAG
GTTTCCCCAATGAACAATTTCTCTTTTGATTTTCTAAGACTTCAAAAAGT
ATTTTCCAATACAAAAGTCTGTCTCCCATAGGGTAATATATTATTTTTTA
AAAAGGTTTGTATTTTGATTAAAATCTTAATAACTGAGAAATGGATTGCA
CTGTAAAAAAGAAATGTTTGCTGCTGCTCATGAGGATTTGAGTTTGATTT
CCAGTGTCCATGTTGCCAGCTCACAGCTGCCTATAACATCCTGTGTCCAC
TATTGGCCTCCTTGGGCACCTGCACATGTGTTGCATATAGATACACACAC
ACAAAGATTAAAAGCTTTAAAACTCTGAACTATTGAAAATATTTCTTCAG
AATAGTTCAGTTATCATCAGCTGTATTTGTTATGCTTGCTTTACTATTTA
TTGGTGTTCCTGAGTGTGTTCTGAGAATTTGTATTTTGATAAGAAGTTCT
AGTATTCACTTGAGAAGAATGGCAAGATTTTCCAGGNACTTATGTCATTC
CCTTTGATTTTCCCTGGTCTN

Query= MSMg01no388_j12.g1 MSMg01no388_j12.g1 CHROMAT_FILE:
MSMg01no388_j12.g1 PHD_FILE: MSMg01no388_j12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:58 2005
         (596 letters)



>mm_chr11_7659753_7660748
          Length = 996

 Score = 1060 bits (548), Expect = 0.0
 Identities = 560/564 (99%)
 Strand = Plus / Minus

                                                                       
Query: 33  gtctcccattctccacattccttttattgaagttgaacagcatcttcttagtttgctaat 92
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 gtctcccattctccacattccttttattgaagttgaacagcatcttcttagtttgctaat 937

                                                                       
Query: 93  tgattgtctagactgttccttcatctgaacactgaggtttccccaatgaacaatttctct 152
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 936 tgattgtctagactgttccttcatctgaacactgaggtttccacaatgaacaatttctct 877

                                                                       
Query: 153 tttgattttctaagacttcaaaaagtattttccaatacaaaagtctgtctcccatagggt 212
           |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 876 tttgattttctaagacttcaaaaaatgttttccaatacaaaagtctgtctcccatagggt 817

                                                                       
Query: 213 aatatattattttttaaaaaggtttgtattttgattaaaatcttaataactgagaaatgg 272
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 816 aatatattattttttaaaaaggtttgtaatttgattaaaatcttaataactgagaaatgg 757

                                                                       
Query: 273 attgcactgtaaaaaagaaatgtttgctgctgctcatgaggatttgagtttgatttccag 332
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 attgcactgtaaaaaagaaatgtttgctgctgctcatgaggatttgagtttgatttccag 697

                                                                       
Query: 333 tgtccatgttgccagctcacagctgcctataacatcctgtgtccactattggcctccttg 392
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tgtccatgttgccagctcacagctgcctataacatcctgtgtccactattggcctccttg 637

                                                                       
Query: 393 ggcacctgcacatgtgttgcatatagatacacacacacaaagattaaaagctttaaaact 452
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ggcacctgcacatgtgttgcatatagatacacacacacaaagattaaaagctttaaaact 577

                                                                       
Query: 453 ctgaactattgaaaatatttcttcagaatagttcagttatcatcagctgtatttgttatg 512
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ctgaactattgaaaatatttcttcagaatagttcagttatcatcagctgtatttgttatg 517

                                                                       
Query: 513 cttgctttactatttattggtgttcctgagtgtgttctgagaatttgtattttgataaga 572
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cttgctttactatttattggtgttcctgagtgtgttctgagaatttgtattttgataaga 457

                                   
Query: 573 agttctagtattcacttgagaaga 596
           ||||||||||||||||||||||||
Sbjct: 456 agttctagtattcacttgagaaga 433


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space:   577796
Effective search space used:   577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)