Query= MSMg01no389_a21.b1 MSMg01no389_a21.b1 CHROMAT_FILE:
MSMg01no389_a21.b1 PHD_FILE: MSMg01no389_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:32 2005
(297 letters)
>mm_chr11_83443596_83444293
Length = 698
Score = 540 bits (279), Expect = e-158
Identities = 291/297 (97%), Gaps = 5/297 (1%)
Strand = Plus / Plus
Query: 4 gaattctcctttgtgcc---ggatttagcaattctattctgttctgggagatacagcatc 60
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctcctttgag--aaaggatttagcaattctattctgttctgggagatacagcatc 261
Query: 61 ctagtttctggatgggaaaaggaggcctaacaggtttttgacaagaagtagactatagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctagtttctggatgggaaaaggaggcctaacaggtttttgacaagaagtagactatagac 321
Query: 121 aaatagtaacacctaggttctagcagtatggtagaacttgatttctgatgggttccaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aaatagtaacacctaggttctagcagtatggtagaacttgatttctgatgggttccaggt 381
Query: 181 ggcatttctcaagcagaaacagaagtaatttgattggaaaattaaattccttgtagagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ggcatttctcaagcagaaacagaagtaatttgattggaaaattaaattccttgtagagag 441
Query: 241 atgtggagtctcaaagccaaaaatcaagaaacatgcaaagaaaggaaaatacagaaa 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atgtggagtctcaaagccaaaaatcaagaaacatgcaaagaaaggaaaatacagaaa 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 698
Length adjustment: 9
Effective length of query: 288
Effective length of database: 689
Effective search space: 198432
Effective search space used: 198432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_a21.g1 MSMg01no389_a21.g1 CHROMAT_FILE:
MSMg01no389_a21.g1 PHD_FILE: MSMg01no389_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:32 2005
(472 letters)
>mm_chr11_83599558_83600429
Length = 872
Score = 866 bits (448), Expect = 0.0
Identities = 466/472 (98%)
Strand = Plus / Minus
Query: 1 cattccctctgtcccctcggtgagcttggtcatgagggctaccatctcccctccgaggcc 60
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 cattcccgctgtccccttggtgagcttggtcatgagggctaccatctcccctccgaggcc 613
Query: 61 tcggtgctcgtcgatacgagggggtgttgtactcctttccaattcactcaacagactctt 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 612 tcggtgctcgtcgatacgagggggtgttgtattcctttccaattcactcaacagactctt 553
Query: 121 gccaggacctgttcaggcaaggaaaggccaacaagacaggaagtgacttatatccagcag 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gccaggacctgttcaggcgaggaaaggccaacaagacaggaagtgacttatatccagcag 493
Query: 181 ggagggccacagataagcaggcaggtgaccataaaagagtggtaaagcatgttctgaaag 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 492 ggagggccacagataagcaggcaggtgaccataaaagagtggtaaagcgtgttctgaaag 433
Query: 241 atggggctagcaaggagagtacgttttccctccatcgggagttttcaagccagtactgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atggggctagcaaggagagtacgttttccctccatcgggagttttcaagccagtactgag 373
Query: 301 catccagtggtaactaccccagcaaatggggccaagcagaaaagggtccaggaagaaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 catccagtggtaactaccccagcaaatggggccaagcagaaaagggtccaggaagaaaag 313
Query: 361 cctgcaacctaggaacaagggacatcccggagacggagggatggtgtgaataccacggac 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 312 cctgcaacctaggaacaagggacatcccggagacggaaggatggtgtgaataccacggac 253
Query: 421 aatcgctgaagctcttagggcttcccttccatgtcaacctcagttcatgtgc 472
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aatcgctgaagctcttagggcttcccttccatgtcaacctcagttcatgtgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
