Query= MSMg01no390_i18.b1 MSMg01no390_i18.b1 CHROMAT_FILE:
MSMg01no390_i18.b1 PHD_FILE: MSMg01no390_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:29 2005
(457 letters)
>mm_chr11_121649917_121650773
Length = 857
Score = 795 bits (411), Expect = 0.0
Identities = 441/457 (96%), Gaps = 10/457 (2%)
Strand = Plus / Minus
Query: 1 caacaataatgctggccaggaccatcctcctcccttggaaacctaaagctctctcttaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 caacaataatgctggccaggaccatcctcctcccttggaaacctaaagctctctcttaac 416
Query: 61 cttaaaccggtgctgttccgggcagccatgtcctgtctagctctttgtacctatgctgtc 120
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 415 cttaaaccggtgctgttccaggcagccatgtcctgtctagctctttgtacccatgctgtc 356
Query: 121 tctagaagcttcccaccagacatcacagctcctctggcagggattctggtcttactgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tctagaagcttcccaccagacatcacagctcctctggcagggattctggtcttactgctg 296
Query: 181 ttttaatttgaatttcactgagaacaccatggttgagaaaccacatgcacactgcctgtt 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 295 ttttaatttgaatttcactgagaacaccatggttgaggaaccacatgcacactgcctgtt 236
Query: 241 tgtctcagttactcatctttcccttgaagatgcttatatatatatacatacatacataca 300
||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 235 tgtctcagttactcatctttcccttgaagatgcttatatat----------atacataca 186
Query: 301 tacatacacaaggaatgacttgtatatcctaaacattaaactgatgaggcttagaggttg 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tacatagacaaggaatgacttgtatatcctaaacattaaactgatgaggcttagaggttg 126
Query: 361 gaaatatcctgccctacgtgccacgtataattaaagttgtgaaagggcttctacatcatt 420
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 125 gaaatatcctgccctacgtgccacatataattaaagttgtgaaagggcttctacatcact 66
Query: 421 tttgtagtcacagtgaataaacaaagtaaatgccttc 457
|||||||||||||||||||||||||||||||||||||
Sbjct: 65 tttgtagtcacagtgaataaacaaagtaaatgccttc 29
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_i18.g1 MSMg01no390_i18.g1 CHROMAT_FILE:
MSMg01no390_i18.g1 PHD_FILE: MSMg01no390_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:30 2005
(231 letters)
>mm_chr11_121467118_121467748
Length = 631
Score = 447 bits (231), Expect = e-130
Identities = 231/231 (100%)
Strand = Plus / Plus
Query: 1 tctcttgatttggacagctttgtatttcatgaagatgtgtgagcatctactgttgcttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcttgatttggacagctttgtatttcatgaagatgtgtgagcatctactgttgcttag 260
Query: 61 aaactccctggtggttttggatcttgctttatactgactggtggattcagatcaagagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaactccctggtggttttggatcttgctttatactgactggtggattcagatcaagagga 320
Query: 121 tctcagttgatgtcctccctctctgagtctttgcccactccagtttgccccattaagagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctcagttgatgtcctccctctctgagtctttgcccactccagtttgccccattaagagg 380
Query: 181 atctatgcctagttttcataggatcttgtatggggttttggtgtggttttc 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atctatgcctagttttcataggatcttgtatggggttttggtgtggttttc 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
