GGGTXXXXXXXXXXXXXXXXXXXXXTTCCAGGATCCGCGGAATTCTCAAC
TAAGTACTACTGAATGGCTGAGAAGCACCTGAAAAAATGTTCAATATCCT
TAATCATCAGGGAAATGCAAATCAAAACAGCCCTGAGATTCCATCTCACA
CCAGTCAGAATGGCTACGTTCAAAAATTCAGGTGACAGCAGATGCTGGCA
AGGATGTGGAGAAAGAGGAAAATTCTTCCATTGCTGGTGGGATTGCAAAC
TTGTACAACCACTCTGTAAATCAATTTGGCAGTTCCTCCGAAAACTGGAC
ATACTACTACCGGAAGATCCCACAATACCTCTCCTGGGCATATACCCAGA
AGATGTTCCAATTTGTAATAAGAAAAAATGCTCCACTATGTTGATAGCAG
CCTTATTTTTACCAACCAGAAGCTGGAAAGAACCCACATGTCCCTCAACA
GAGGAATGGATACAGAAAATGTGGTACATTTATACCATGGAGTACTACTC
ATCCAATTAAAGCAATGAATTTATAAAATTCTTAGCCCAGTAGATACCTC
TGGATGATATCATCCTGAGTGAGGTAAAGCAAGCCCAAAAGACCCCTTCT
GGTTGGCCTAGCCCGCCCTCCCTGGAAAGAGAGGCCCATTCGCACTTGCA
ACTTTTTATGCCCCCCGCACCGGGGGACCCCAGGGCTAAAAACCCCAACG
GTCTGCCCCCTTTTAAAGCTCCCCCCTTTCTTCCCCTACCCCCCCTCTCC
TCCCTTCCCCCCCC

GATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAATATCCATAGGATCTCTGACTGCTAT
CTCTTACTTTAATAGAACACCTGAGAGAAAGTGATTTAGGAAGCAAAACT
AATTTTTATAGCTCTGAAAACTCAAAAGTTCAAGGGCAGGGGCCTCCATC
TGCCGAGTTTTCGTTTTAATAGGGACTTTGGAGAGATCTAAGGCAGCATG
AAATGACATGGAAAGACAGGAGGTAGGCAAGTAAAACATACTTTTTTAAT
CAAGCTGCTTAATGATCCATTAATCCATGTATGGATTAAGACATGAATCA
AAGATCCTGATAATCCAATCATCTCATACGTTTCAACCTTTGTTGAGTCA
TTCAACTATTGTATGAATATGGAAAATTAACTTTCCAACAAGTAAATTTT
AGGAGACATATTCAAATTTAAATCTTATCTCTGTGAAATTGTAAAGAAGT
AATGAGAAATTTAAGCATCTTTTCTGGTGTGCTTCAAACTACAAAAGTGA
CACAATGTTATTTGGAGTAAGTTAGGAAAGTGGAAAAAAAACTTGAATTT
ACTGAATTTGAATTGAACCAAAAGTTCCTGGAATCCCCCGGGAAGTTGGA
AAACCCTCCTCCAATCACCTACCCTTTTTATTAAACCCTTGGGAGCGGCT
TCCCGGGGACAATAAATGGCTCAGCAACCCCCCCATTTTTTCTCCCCCCA
AAAATACGTATTTTTCCCCTCCCCCGGTTCCCCCTTTCCCTACCTAAAAG
CGCACAGCATTCGTTN

Query= MSMg01no391_d24.g1 MSMg01no391_d24.g1 CHROMAT_FILE:
MSMg01no391_d24.g1 PHD_FILE: MSMg01no391_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:24 2005
         (444 letters)



>mm_chr11_41250185_41251029
          Length = 845

 Score =  806 bits (417), Expect = 0.0
 Identities = 438/445 (98%), Gaps = 1/445 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atatccataggatctctgactgctatctcttactttaatagaacacctgagagaaagtga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 atatccataggatctctgactgctatctcttactttaatagaacacctgagagaaagtga 586

                                                                       
Query: 61  tttaggaagcaaaactaatttttatagctctgaaaactcaaaagttcaagggcaggggcc 120
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tttaggaaacaaaactaatttttatagctctgaaaactcaaaagttcaagggcaggggcc 526

                                                                       
Query: 121 tccatctgccgagttttcgttttaatagggactttggagagatctaaggcagcatgaaat 180
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tccatctgccgagtttttgttttaatagggactttggagagatctaaggcagcatgaaat 466

                                                                       
Query: 181 gacatggaaagacaggaggtaggcaagtaaaacatacttttttaatcaagctgcttaatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gacatggaaagacaggaggtaggcaagtaaaacatacttttttaatcaagctgcttaatg 406

                                                                       
Query: 241 atccattaatccatgtatggattaagacatgaatcaaagatcctgataatccaatcatct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 atccattaatccatgtatggattaagacatgaatcaaagatcctgataatccaatcatct 346

                                                                       
Query: 301 catacgtttcaacctttgttgagtcattcaactattgtatgaatatggaaaattaacttt 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 345 catacgtttcaacctttgttgagtcattcaactattgtatgaatatggaaaattaatttt 286

                                                                       
Query: 361 ccaacaagtaaat-tttaggagacatattcaaatttaaatcttatctctgtgaaattgta 419
           ||||||||||||  ||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 285 ccaacaagtaaaagtttaggaaacatattcaaatttaaatcttatctctgtggaattgta 226

                                    
Query: 420 aagaagtaatgagaaatttaagcat 444
           |||||||||||||||||||||||||
Sbjct: 225 aagaagtaatgagaaatttaagcat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 845
Length adjustment: 10
Effective length of query: 434
Effective length of database: 835
Effective search space:   362390
Effective search space used:   362390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)