Query= MSMg01no392_d14.b1 MSMg01no392_d14.b1 CHROMAT_FILE:
MSMg01no392_d14.b1 PHD_FILE: MSMg01no392_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:41 2005
(490 letters)
>mm_chr11_121270905_121271794
Length = 890
Score = 648 bits (335), Expect = 0.0
Identities = 353/359 (98%), Gaps = 1/359 (0%)
Strand = Plus / Minus
Query: 1 tgtaatggccgcatcactattgcacccgtggacacttcttgcctgtcatggcaatccaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 366 tgtaatggccgcatcactattgcacccgtggacacttcttgcctgtcatggcaatcaaaa 307
Query: 61 cccaaccaggattattgacgacaattcttccccagtagcctacacagtgccttccagtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 cccaaccaggattattgacgacaattcttccccagtagcctacacagtgccttccagtat 247
Query: 121 tatgaaagacgacaaagagagggaatgctgccagcccagtcaagcaaatcaggaaatgca 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 246 tatgaaagacgacaaagagaggggatgctgccagcccagtcaagcaaatcaggaaatgca 187
Query: 181 ttgtcttcagctctagtcttgtcatttagttctgggacactgtcaacaggactggtagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttgtcttcagctctagtcttgtcatttagttctgggacactgtcaacaggactggtagca 127
Query: 241 gcctctctgattttgggggcctcaggagcctccctggccaacagcaataaggaggtagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gcctctctgattttgggggcctcaggagcctccctggccaacagcaataaggaggtagcc 67
Query: 301 cacctctggcactggaacttccgcctaattacatagcttctgggagtgttacacccccc 359
|||||||||||||||||||||| |||||||||||||||||| ||||| |||| ||||||
Sbjct: 66 cacctctggcactggaacttccacctaattacatagcttctcggagtattac-cccccc 9
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_d14.g1 MSMg01no392_d14.g1 CHROMAT_FILE:
MSMg01no392_d14.g1 PHD_FILE: MSMg01no392_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:41 2005
(329 letters)
>mm_chr11_121128574_121129302
Length = 729
Score = 605 bits (313), Expect = e-177
Identities = 325/329 (98%)
Strand = Plus / Plus
Query: 1 ttctcttgtgtctacttcactgtatacttcagtctggcctgtgagcttctgggtgattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctcttgtgtctacttcactgtatacttcagtctggcctgtgagcttctgggtgattgt 260
Query: 61 tctgcctccacctcccatctcacccttagggatgctaagatttgatatgagatactgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgcctccacctcccatctcacccttagggatgctaagatttgatatgagatactgttt 320
Query: 121 tggcttgccgctgtaagttgttaaactgctaagccatctcctggccccagcttttaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggcttgccgctgtaagttgttaaactgctaagccatctcctggccccagcttttaaatt 380
Query: 181 tttattgtccacccgtctgtccatccattcatctatccatccatctgtctatctatttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttattgtccacccgtctgtccatccattcatctatccatccatctgtctatctatttca 440
Query: 241 ggactgtgttcctctgttttttcttgttttggaactctgtaggtcacgatggccccaaac 300
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggactgtgttcctctgtgtagccttgttttggaactctgtaggtcacgatggccccaaac 500
Query: 301 ttacagagatgcacttgcctctgcctcca 329
|||||||||||||||||||||||||||||
Sbjct: 501 ttacagagatgcacttgcctctgcctcca 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
