NCATGGCCTGCATGTCACNNNNNNGACTCNCTATTTCCAGAGGATCCGCG
GAATTCACCTGCNCTAGCTTCAACAGAACAAGAATCACAGGCATGCTCAC
TAGGCATGAGCTAAAGCATTAAGGTTGTATTCCAACTCTGGAAGAACACT
GACCAAATATACCTCCACCCCACAATTGCTTCTTCTGCTGAGCTCCTCGT
TGGCCTCCTTCTCCCTCTTTCCCACCAACTCAAACATGGAGGAGCAGCAT
TAATTTTACTCCTTGGGATAAGTTATAATTAAGGACACTGTATGCCCATC
CTCACTTAACCTCAATGCACACACAGAATTACAACTACTGGGCCAAATCA
GATTCGGCAAAGAGTCTGTTCAAATGCATATTGAATGTCATCCAACTTTA
CATTGGCTCTGATTTTTACCCACTACTTGAAATACTGTTTTTCGGTCGCC
ATTTTTCCTCTCATTCCCGCCACACAATATTTGTTAGCCAAACACATAAT
TATACCGAAACTTACTGTCCTTTTCTTTTACCGCATGCCNGCGCTTAATC
ACTCTACCCCCATTTTCTTCGCCCCTTTTTTCCCCTTTTTCTTTTATATA
ATCGCCCTCCCTTTTTTTTCTCCTTATTGGCTTTTCCTTCCCCCCTTTTA
TTTTCTCTTATTTATTTCATTTTTTGTAACTCCCTTCTCTTTTACATTTT
ATATTTTTCCCCCCCCACCCTTCTTTTTTTTGTTTTATCCACATTTTTTC
TCCCTCCCCTTATTCCGGCTCCTTTTTCTCCTCTCCCN

CCCCCATGATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAAAATGCTGGATCAAATACC
ATGCATTCCAATAATGATGTATAAAATGGACTACTTTCTGTCTACTAAAT
ACATAATTACAAACATTTCCCACCCACAGCAATTCTGGGTAAATTCAAGG
CAAGTACTTTTTTATTTTTAAATATTTTATTGTTTTTCACATGGCTTTTG
CAGGAATCTCTGAGTTTTTAAGAGCTATGAATAAATAACTTAAGAGGGTG
GACAGTTTATAAATATGTATAAAAAGTACCAGGTACATAATTCCCTGTAT
AGCTATGTGAATGGCAGCCTTGGGAGATTTTCTCAAATGCCTTACTTAAA
ATGTGTTGTGATTTCTTGAATTGCAGTGATTTTACTAGACAACTAAACTG
TTTCTGTTTAAACATTATGTGACACACGCCGAAGTTTAAAAGGGACATCA
GTAAATGAGTTTGATGTATATCTTCGCTGAAACTTTTAAAAGTAATCTCT
TAGCCAATAAGCCCCTCACAGGGTTGAGTATGCCAAGTCTCACAATTCTG
TTAAACATTCAAAAGGAGTCCAGGACAAAATTTCCTGAGTGTTCATATTG
TATAGCTACGGGAAAGGAGTAGTAAAAACCATTCTCTCCTTTTCAACACA
GAATAAATTATTTTGGAATTTAAAGGGGACTTTCCCGGCTACGCAAAAGA
TATCTTT

Query= MSMg01no395_n01.b1 MSMg01no395_n01.b1 CHROMAT_FILE:
MSMg01no395_n01.b1 PHD_FILE: MSMg01no395_n01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:46 2005
         (274 letters)



>mm_chr11_36850910_36851583
          Length = 674

 Score =  514 bits (266), Expect = e-150
 Identities = 272/274 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   caagaatcacaggcatgctcactaggcatgagctaaagcattaaggttgtattccaactc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 caagaatcacaggcatgctcactaggcatgagctaaagcattaaggttgtattccaactc 415

                                                                       
Query: 61  tggaagaacactgaccaaatatacctccaccccacaattgcttcttctgctgagctcctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tggaagaacactgaccaaatatacctccaccccacaattgcttcttctgctgagctcctc 355

                                                                       
Query: 121 gttggcctccttctccctctttcccaccaactcaaacatggaggagcagcattaatttta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gttggcctccttctccctctttcccaccaactcaaacatggaggagcagcattaatttta 295

                                                                       
Query: 181 ctccttgggataagttataattaaggacactgtatgcccatcctcacttaacctcaatgc 240
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ctccttgggataggttataattaaggacactgtatgcccatcctcacttaacctcaatgc 235

                                             
Query: 241 acacacagaattacaactactgggccaaatcaga 274
           |||||||||||||||||||||||| |||||||||
Sbjct: 234 acacacagaattacaactactgggtcaaatcaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space:   176225
Effective search space used:   176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no395_n01.g1 MSMg01no395_n01.g1 CHROMAT_FILE:
MSMg01no395_n01.g1 PHD_FILE: MSMg01no395_n01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:46 2005
         (486 letters)



>mm_chr11_36676195_36677080
          Length = 886

 Score =  924 bits (478), Expect = 0.0
 Identities = 484/486 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   taaaaatgctggatcaaataccatgcattccaataatgatgtataaaatggactactttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaaaatgctggatcaaataccatgcattccaataatgatgtataaaatggactactttc 260

                                                                       
Query: 61  tgtctactaaatacataattacaaacatttcccacccacagcaattctgggtaaattcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtctactaaatacataattacaaacatttcccacccacagcaattctgggtaaattcaa 320

                                                                       
Query: 121 ggcaagtacttttttatttttaaatattttattgtttttcacatggcttttgcaggaatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcaagtacttttttatttttaaatattttattgtttttcacatggcttttgcaggaatc 380

                                                                       
Query: 181 tctgagtttttaagagctatgaataaataacttaagagggtggacagtttataaatatgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgagtttttaagagctatgaataaataacttaagagggtggacagtttataaatatgt 440

                                                                       
Query: 241 ataaaaagtaccaggtacataattccctgtatagctatgtgaatggcagccttgggagat 300
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaaaagtaccaggtacgtaattccctgtatagctatgtgaatggcagccttgggagat 500

                                                                       
Query: 301 tttctcaaatgccttacttaaaatgtgttgtgatttcttgaattgcagtgattttactag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttctcaaatgccttacttaaaatgtgttgtgatttcttgaattgcagtgattttactag 560

                                                                       
Query: 361 acaactaaactgtttctgtttaaacattatgtgacacacgccgaagtttaaaagggacat 420
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 acaactaaactgtttctgtttaaacattatgtgacacactccgaagtttaaaagggacat 620

                                                                       
Query: 421 cagtaaatgagtttgatgtatatcttcgctgaaacttttaaaagtaatctcttagccaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagtaaatgagtttgatgtatatcttcgctgaaacttttaaaagtaatctcttagccaat 680

                 
Query: 481 aagccc 486
           ||||||
Sbjct: 681 aagccc 686


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space:   416976
Effective search space used:   416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)