XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTGCT
GTTCCAGTCTGGAGCTCACCTGCTGGTCTCCTGACTGTTCTCAGCTATTC
CCAGCAACTCTCTTCCTTCTGTCCCTATCACAGTGCCAAGACCCTAGCCT
AATGAATAGTTTTTTCTACTCTACTAGTCTACTATTCTTCCATTCTAATA
TTTCTTCTAGTCTACTGATCAAGAACCCAGTGTTTCAAAGCTTGGGAAAG
TGACTCGGGGAAAAAAGGACAAGTAGCGGAAGTTGGTGTGGGGCCCAACT
CAAAGGAAAGGTCAGTACCTACACACTAGCTGTTATCCTTCCATAATGTC
TTGGTTTATAACCAATGTTTGAGCATCTATGCACTTTGGGACATCAGTTA
GGATGACTGGTACACCATGCTTGAGTCCACACCAGGTTATTCTGAAGATG
GCATATGAACTCCAACAGTGCTGGGTTTTACCGTGTTCCTTCAAATGCAG
TTAAAGTTGTAGGAAGATTCGAACTGAAAATCTAATATATAAGGCCCCCA
GTGACAACTATGTAAAGCTCATCTGCTGCTCTGTAATCTGCTCTCTCAAA
GGTAGAAAGTCATCCTCACTTCTCTTAATCTCCCTTCAAGTGCCAGACAC
CCATGTATACCTTCTATATGGAGCCTATTACAGGGCCTACAAACACATCC
TGAATTATTTTTGGTTTAAAAAATTATTGTTAAACCCCCGGACCCCCCT

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTGATGATGCAGATGTTGATTAAATGGATG
AGGATATCAAAGTAAATATTACATCTGTTTTCTGTAGCTTAATGAAAATA
TGGTTCTAATTTATAAACAAATAGATCACAGCAGAGACACAAAATAATTT
GCTAATATGGTACTTTTATAATTAAAATATAACATTAGAATTAAAAACAT
CATGGGATAAAATTTATAGCCAGATAATGATTATAGCAAAAGGATTCATA
TGGCTTTTTATATTTCATTTTAAATGTGATTGAAACACTTACTACAACCT
CAAGGATTTTTGGAATAGTATAAATATTAGGACATACATGCGGTTGGAGT
TCTGAAGAAAAGAAGCAAGAATATGGGAAAATCAAAATGTTGGAGAACCA
AGGAAATTATAAACTATGTATGCATAAGAAATAAAAGATGATAATCCTCA
GGGAAATGCAAATCAAAGCAACCCTGAGATTCTACCTCACACCAGTCAGA
ATGGCTAAGATCATAAACTCAGGTGACAGCAGATGCTGGCGAAGATGTGG
AGAAAGAGGAACACTCCTCCCTTGTTGGGGGGATTGCAAGCTTGTACTCT
GGAAACCATCTTGTGTGTCCTCACAAAAATGGACATTGTCTACCCGAAGA
ACTCCACATACCTCTCCTGGGGAAATATTGAGGAAATTGTTCCTCTTGTT
T

Query= MSMg01no396_a15.b1 MSMg01no396_a15.b1 CHROMAT_FILE:
MSMg01no396_a15.b1 PHD_FILE: MSMg01no396_a15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:04 2005
         (562 letters)



>mm_chr11_11892058_11893020
          Length = 963

 Score =  998 bits (516), Expect = 0.0
 Identities = 550/562 (97%), Gaps = 5/562 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcttgctgttcc--agtctggagctcacctgctggtctcctgactgttctcagct 61
           |||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 204 ggaattcttgctg-gccaaagtctggagctcacctgctggtctcctgactgttctcagtt 262

                                                                       
Query: 62  attcccagcaactctcttccttctgtccctatcacagtgccaagaccctagcctaatgaa 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 attcccagcaactctcttccttctgtccctatcacagtgccaagaccctagcctaatgaa 322

                                                                       
Query: 122 tagttttttctactctactagtctactattcttccattctaatatttcttctagtctact 181
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tagtttcttctactctactagtctactattcttccattctaatatttcttctagtctact 382

                                                                       
Query: 182 gatcaagaacccagtgtttcaaagcttgggaaagtgactcggggaaaaaaggacaagtag 241
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 383 gatcaagaacccagtgtttcaaagcttgggaaagtgactc-gggaaaaaaggacaagtag 441

                                                                       
Query: 242 cggaagttggtgtggggcccaactcaaaggaaaggtcagtacctacacactagctgttat 301
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cagaagttggtgtggggcccaactcaaaggaaaggtcagtacctacacactagctgttat 501

                                                                       
Query: 302 ccttccataatgtcttggtttataaccaatgtttgagcatctatgcactttgggacatca 361
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 502 ccttccataatgtcttggtttataaccaatgtttgagcctctatgcactttgggacatca 561

                                                                       
Query: 362 gttaggatgactggtacaccatgcttgagtccacaccaggttattctgaagatggcatat 421
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 562 gttaggatgactggtacaccatgcttgagtccccaccaggttattctgaagatggcatat 621

                                                                       
Query: 422 gaactccaacagtgctgggtttt-accgtgttccttcaaatgcagttaaagttgtaggaa 480
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaactccaacagtgctgggtttttaccgtgttccttcaaatgcagttaaagttgtaggaa 681

                                                                       
Query: 481 gattcgaactgaaaatctaatatataaggcccccagtgacaactatgtaaagctcatctg 540
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gattcaaactgaaaatctaatatataaggcccccagtgacaactatgtaaagctcatctg 741

                                 
Query: 541 ctgctctgtaatctgctctctc 562
           ||||||||||||||||||||||
Sbjct: 742 ctgctctgtaatctgctctctc 763


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 963
Length adjustment: 10
Effective length of query: 552
Effective length of database: 953
Effective search space:   526056
Effective search space used:   526056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)