Query= MSMg01no396_i20.b1 MSMg01no396_i20.b1 CHROMAT_FILE:
MSMg01no396_i20.b1 PHD_FILE: MSMg01no396_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:42 2005
(442 letters)
>mm_chr11_4907741_4908582
Length = 842
Score = 600 bits (310), Expect = e-176
Identities = 335/348 (96%), Gaps = 9/348 (2%)
Strand = Plus / Minus
Query: 4 gaattccttcaag-----attcccacacctcgagctcagggagaactaggattccattca 58
||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 344 gaattccttcaagagagcat----acacctcgagctcagggagaactaggattccattca 289
Query: 59 gtcacctacaagctgtgacttgagcaggttacacagcctcctcgagactttcgataaagt 118
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gccacctacaagctgtgacttgagcaggttacacagcctcctcgagactttcgataaagt 229
Query: 119 taaaaactggggagatggctccttcagtgaagtgaggacatgagttcaaatctctagctc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 taaaaactggggagatggctccttcagtgaagtgaggacatgagttcaaatctctagctc 169
Query: 179 ccatgtaaaagccaggtgcagggttgcgtgactgtaagtggaagtaggtgggtcccaaga 238
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 168 ccatgtaaaagccaggtgcagggttgcgtgactttaagtggaagtaggtgggtcccaaga 109
Query: 239 actcattagtcagccagtctaactggatcagggagctcttgtaggtgtgagaaccccctc 298
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 108 actcattagtcagccagtctaactggatcagggagctcctggaggtgtgagaaccccctc 49
Query: 299 aaatctccaaatatttacattacaattcagaacagcagcaaaattagt 346
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 aaatctccaaatatttacattacaattcagaacagcagcaaaattagt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_i20.g1 MSMg01no396_i20.g1 CHROMAT_FILE:
MSMg01no396_i20.g1 PHD_FILE: MSMg01no396_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:42 2005
(439 letters)
>mm_chr11_4752112_4752950
Length = 839
Score = 818 bits (423), Expect = 0.0
Identities = 435/439 (99%)
Strand = Plus / Plus
Query: 1 tgtagtatttattagacattgttgctagacttgtcctgtagctcaagtctcactcttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtagtatttattagacattgttgctagacttgtcctgtagctcaagtctcactcttctg 260
Query: 61 caagagatccctggacgactaggacgccccagccagggctgggtagttgttgactggacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caagagatccctggacgactaggacgccccagccagggctgggtagttgttgactggacc 320
Query: 121 caccagcgaggctgccaccaaagtgatgcttcagggtgctgtgggctgggtgtggagtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caccagcgaggctgccaccaaagtgatgcttcagggtgctgtgggctgggtgtggagtta 380
Query: 181 tcttcatttttattgcttcagtgcttccctgctggtgggagagccaggttggacgcttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttcatttttattgcttcagtgcttccctgctggtgggagagccaggttggacgcttcc 440
Query: 241 gactgagacttctaatagcccaggagctgccagtgcataagtgatctggagatgccctga 300
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gactgagacaacaaatagcccaggagctgccagtgcataagtgatctggagatgccctga 500
Query: 301 ggagcagcgaaaggaaggatcacacagtggagctaaagcataaggcttgtgatgagtaat 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggagcagcaaaaggaaggatcacacagtggagctaaagcataaggcttgtgatgagtaat 560
Query: 361 cattcatttttgtagaagatatcctcggtgctaggcttagagctaatctgcaaaatactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattcatttttgtagaagatatcctcggtgctaggcttagagctaatctgcaaaatactc 620
Query: 421 catttaaagttcctgcgaa 439
|||||||||||||||||||
Sbjct: 621 catttaaagttcctgcgaa 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
