Query= MSMg01no396_n06.b1 MSMg01no396_n06.b1 CHROMAT_FILE:
MSMg01no396_n06.b1 PHD_FILE: MSMg01no396_n06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:03 2005
(372 letters)
>mm_chr11_47529929_47530700
Length = 772
Score = 658 bits (340), Expect = 0.0
Identities = 360/370 (97%), Gaps = 7/370 (1%)
Strand = Plus / Minus
Query: 6 gaattcctacctgtttcc---ctctcaccagcaatgtgatgttgaatgtttgatgacagt 62
||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gaattcctacctg----cagactctcaccagcaatgtgatgttgaatgtttgatgacagt 534
Query: 63 aataacccttaagtctgacccttgtgaaaatccaatgaattttgcaaggtctgggtgctc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aataacccttaagtctgacccttgtgaaaatccaatgaattttgcaaggtctgggtgctc 474
Query: 123 actgatgttattataaacactattattatcaatcttgattactattcatgatggtttgta 182
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 473 actgatgttattataaacactattattatcaatattgattactattcatgatggtttgtg 414
Query: 183 tcatatataagtcaccattattaacattgcagagtttcacttcacagatccagttttaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tcatatataagtcaccattattaacattgcagagtttcacttcacagatccagttttaaa 354
Query: 243 tggtccctgctactgaacactgttttgttttcagtttgtatacaaaggtttgatttaggt 302
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 353 tggtccctgctactgaacactgttttgttttcagtttgcatacaaaggtttgatttaggt 294
Query: 303 tttaatatacacacatatataggatagatgggtgcaccctcctcagtgccttatatattg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tttaatatacacacatatataggatagatgggtgcaccctcctcagtgccttatatattg 234
Query: 363 tagattgtaa 372
||||||||||
Sbjct: 233 tagattgtaa 224
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_n06.g1 MSMg01no396_n06.g1 CHROMAT_FILE:
MSMg01no396_n06.g1 PHD_FILE: MSMg01no396_n06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:03 2005
(309 letters)
>mm_chr11_47389711_47390419
Length = 709
Score = 557 bits (288), Expect = e-163
Identities = 305/312 (97%), Gaps = 4/312 (1%)
Strand = Plus / Plus
Query: 1 aatggcctttctaatgttcaaacacagattatgatttgccttttattattttgctcctag 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatggcctgtctaatgttcaaacacagattatgatttgccttttattattttgctcctag 260
Query: 61 agcctctcttttatacttcctgtcttcacaagaaggtaagtttgagaatctttccagtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcctctcttttatacttcctgtcttcacaagaaggtaagtttgagaatctttccagtgt 320
Query: 121 gccaaaccatgggatcctgggagcactgctaaatggatggtgcccacaccatctcaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccaaaccatgggatcctgggagcactgctaaatggatggtgcccacaccatctcaggtt 380
Query: 181 atcctaccatcctggaaaggccattttggtttagggtatgta-a---acacacacacaca 236
||||||||| |||||||| ||||||||||||||||||||||| | |||||||||||||
Sbjct: 381 atcctaccaccctggaaaagccattttggtttagggtatgtacacacacacacacacaca 440
Query: 237 tatacacacacacacctgtgtgcatatatatgtgtatatgtatgtgtgtatacatgtata 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatacacacacacacctgtgtgcatatatatgtgtatatgtatgtgtgtatacatgtata 500
Query: 297 tatgtgtatgtg 308
||||||||||||
Sbjct: 501 tatgtgtatgtg 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
