CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAA
TTCCTGGCCGTCTCTGTACTTCATCTGGACTTTGTCAACACTGGTTCTGA
GAAGAAGAAAGTTACAAACATCGTTTCCCAGATGATCAACATTACCCACT
GATGATATATGCTCTGGTGAAAAAGTTATCCATGGTCTTAAACCAGGTCT
GCCTGAAGATTATTTCACGTTCTAAGTCAAAATTCTCTTTTCTAAGATCC
CAGAAACTTCTTACAATGAACCATCATATGTCATGATGTTTTAGACAAAA
CTTTTTTTCTTGAGATTTATAATTCTCTTTAATATTTCTCACTGACTCAA
GAGGTGTGAGCCATCCTCATAATACACCACTGCTAAGCCACTGATTTTCC
AGCTAAATTTCTGTTTGATCTTTTCTGGGTCCTCAATTCCAGCTCTCTCC
ATAGAGTGACATCCCCCTCTTCCGTTGCAGCTCCTTTGGTGCTTTTCTTA
CATTCTGAGTTGTTTATCCCTGGCCTGTGTATCGGCTTCCTCATCCATGT
AATCTCATATGCCCCATACCATCCGGAAAATGGTCTTCATTCTTTTGCCA
CACCTGATCTATTGTTTACAATTGCCCTTACCTGGTATTTTGAATAAGAC
TTATACATTCTACCCAGTCCCCCCTCTTTTTTTTAGCGTTCCATTATGTT
CCAACCATAAACACTTTTGCCTAATATATTCATCCCCCTCTATATGAGCG
GTCTTCCCCTCATATTTTCTCCCCCTTTCTN

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTTT
TTAATGGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATA
TATGTTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTT
CCCAATCTGTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTG
CAGAAACTTTGGAGTTTCATTACGTCCCATTTGTCAATTCTCGATCTTAC
AGCACAAGCCATTGCTGTTCTGTTCAGGAATTTTTCCCCTGCGCCCCTAT
CGTCAAGGCTTTTCCCCACTTTCTCCTCTATCACTTCCCGTGTCTCTGTT
TTTATTGTGATCCTCCCCCCCCCCCCCTACTTTTTTCTCTTTTCCTCCCT
GTTTTTTCCTTTTGTTCTTCACCCCCCTTTCCCTCTCTTATGATCCTTTC
CTCCCCCCTTCACTTTTTCCCCTTCTTTCCTTTTTTCCTTTCCCTCTTTT
CCCCCTTCCTCCGCTCCTCCCTCATTTTCTTTTCATCCCCTCTTTTTTTT
CTTTTCTTTCCGTCCTCCCTTTCTCCCCCTTTCTCCCCCTTTCTCCCCCC
TTATCTCTTTCCCTCCCCTTCTCTCCCTCCCCCTCCTCCTTCTTACTTCC
TCTCTCCCCTATTCTTCCTCCCTCCCTTGCCTCTTTTTTTTTCCGTCTTC
CCCCCCCCTCCTCCTTCTTTTTCACCTCTTCCCTTTTTTTCTTTTCTTTT
TTCCTCCTCTT

Query= MSMg01no397_b08.b1 MSMg01no397_b08.b1 CHROMAT_FILE:
MSMg01no397_b08.b1 PHD_FILE: MSMg01no397_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:23 2005
         (483 letters)



>mm_chr11_28568867_28569751
          Length = 885

 Score =  853 bits (441), Expect = 0.0
 Identities = 468/481 (97%), Gaps = 8/481 (1%)
 Strand = Plus / Minus

                                                                       
Query: 7   ggaattcctggccgtctctgtacttcatctggactttgtcaacactggttctgagaagaa 66
           |||||||||||||| ||||||||||||||||||||||||||||||||||||||   ||||
Sbjct: 684 ggaattcctggccgcctctgtacttcatctggactttgtcaacactggttctg---agaa 628

                                                                       
Query: 67  gaaagttacaaacatcgtttcccagatgatcaacattacccactgatgatatatgctctg 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gaaagttacaaacatcgtttcccagatgatcaacattacccactgatgatatatgctctg 568

                                                                       
Query: 127 gtgaaaaagttatccatggtcttaaaccaggtctgcctgaagattatttcacgttctaag 186
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 567 gtgaaaaagttatccatggtcttaaaccaggtctgcctgaagtttatttcacgttctaag 508

                                                                       
Query: 187 tcaaaattctcttttctaagatcccagaaacttcttacaatgaaccatcatatgtcatga 246
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 507 tcaaaattctcttttctaagattccagaaacttcttacaatgaaccatcatatgtcatga 448

                                                                       
Query: 247 tgttttagacaaa-----actttttttcttgagatttataattctctttaatatttctca 301
           |||||||||||||     ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 447 tgttttagacaaaattttactttttttcttgagatttgtaattctctttaatatttctca 388

                                                                       
Query: 302 ctgactcaagaggtgtgagccatcctcataatacaccactgctaagccactgattttcca 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ctgactcaagaggtgtgagccatcctcataatacaccactgctaagccactgattttcca 328

                                                                       
Query: 362 gctaaatttctgtttgatcttttctgggtcctcaattccagctctctccatagagtgaca 421
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gctaaatttctgtctgatcttttctgggtcctcaattccagctctctccatagagtgaca 268

                                                                       
Query: 422 tccccctcttccgttgcagctcctttggtgcttttcttacattctgagttgtttatccct 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tccccctcttccgttgcagctcctttggtgcttttcttacattctgagttgtttatccct 208

            
Query: 482 g 482
           |
Sbjct: 207 g 207


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 885
Length adjustment: 10
Effective length of query: 473
Effective length of database: 875
Effective search space:   413875
Effective search space used:   413875
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)