NCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTCATCATCTCTCCTTCCAACTGCTTGCCTTAGCGGAACATGCT
TTTACCTATATCTGCTTCAGTTAAATGTTCCTTCGTGTTTCTGCTTTAGA
TTATATCCATTCACTTGTGCCCAATTCAGTAAAACACTCCTTCAGTTGTT
TGCCCCAGTAAAGCACCTTCCAACGCAACTGACTTTCCAAAAAAACCTTA
AGTTTCTACTTCATATTCCCATTAAAATAATATGTGAAGGAACTTTTTCA
ACAGCCCATGGAAAAGAACTTATGATATTCAGTTCTTATGAGCTAAAGCA
GAAGTTTGGACATGTTTTGATGATCAAGTAGAAACTTATAGACTGAGTTT
TCCCAAAAGAAGAACAAGCTAACAGTTTGGGGCCTTGATAATGGATGGAG
GCAGGTCAAGGCTGCAGCCATGCTATGGAAGGGAACAGTCCCAAAGAAAT
TTTATAGTAATAACATTTGGTGGAAGAAAGATCTACTTGACTCTCCCAGG
CCTTGTTTCTGATCGGGGAAGTGGATTTGTTGTTCCCAGTGAAACATGTC
AATTTTAACATTCCCTCCGACTTTAGGAAAACTAAAAAAATTTTGTGTAA
ATGCCCCTTATCGCCCACCTTTTCATTAACAACCCTTTTATTTATATTTT
TTAGGTTAATAAAACAATAGGAATTTAGTTTCCTCATTTTTCACCCCCCC
CCTACCTTTTTTCTAAAAAAGATTTTCG

CCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAATGTGCTTTCCATGGACAGTAG
CTCCTACAGACACAAACACTAGTTTCTCATAAAGTCCAAATTTCTAGCTC
TCACTAGAAAATGCCCATTCAGCTGAATGTAATTGTCTTATTGAAATAAA
GAAACATAAATGTTAAACTGTGCTCGGTCACACAGGAACACTACTATGAA
TGTTAAATGTTAAACTGTGCTCAGGCACACAGGAACACTACTATGAATAA
AGCAACACAATATCTTCCAGGATCTTCTAAATATATAGTACCATTCTTTA
ATGGCCACAATTTATCCTGTGACTTAAGAGACGACTCATACCGACAAAAA
TATTTACAAACAACACAGAAAAGTTTATAATGTATTCTGTACCTCACAAG
GCTATCTTTACTATTTCTTTTTTTCCTTCTTTCCTTCTTTCCTTCCTTCC
TCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTTCTTTCCT
TCCTTCCTTCCCTCCTTCCTCCCCTCCTTCATTTTATATTATTCCAATTA
TTCATACCATCTATCCCTCTTCTTTTTCTCTCCCCCCTTCTCCACCATTT
TTTTTTCTTATTTTTTTACCCCCTTTTCTTCTTCCTTTACCCTTTTCTCC
CCTCTTCTTTCCTATTTTTTTATCATCTTTCTTCTTTCCTCCCACCCCTT
TCATTCTCCCTTCCCTATCTTTATCN

Query= MSMg01no397_m10.b1 MSMg01no397_m10.b1 CHROMAT_FILE:
MSMg01no397_m10.b1 PHD_FILE: MSMg01no397_m10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:19 2005
         (419 letters)



>mm_chr11_18430487_18431305
          Length = 819

 Score =  803 bits (415), Expect = 0.0
 Identities = 418/419 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aactgcttgccttagcggaacatgcttttacctatatctgcttcagttaaatgttccttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactgcttgccttagcggaacatgcttttacctatatctgcttcagttaaatgttccttc 260

                                                                       
Query: 61  gtgtttctgctttagattatatccattcacttgtgcccaattcagtaaaacactccttca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtttctgctttagattatatccattcacttgtgcccaattcagtaaaacactccttca 320

                                                                       
Query: 121 gttgtttgccccagtaaagcaccttccaacgcaactgactttccaaaaaaaccttaagtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttgtttgccccagtaaagcaccttccaacgcaactgactttccaaaaaaaccttaagtt 380

                                                                       
Query: 181 tctacttcatattcccattaaaataatatgtgaaggaactttttcaacagcccatggaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctacttcatattcccattaaaataatatgtgaaggaactttttcaacagcccatggaaa 440

                                                                       
Query: 241 agaacttatgatattcagttcttatgagctaaagcagaagtttggacatgttttgatgat 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaacttatgagattcagttcttatgagctaaagcagaagtttggacatgttttgatgat 500

                                                                       
Query: 301 caagtagaaacttatagactgagttttcccaaaagaagaacaagctaacagtttggggcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagtagaaacttatagactgagttttcccaaaagaagaacaagctaacagtttggggcc 560

                                                                      
Query: 361 ttgataatggatggaggcaggtcaaggctgcagccatgctatggaagggaacagtccca 419
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgataatggatggaggcaggtcaaggctgcagccatgctatggaagggaacagtccca 619


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space:   332100
Effective search space used:   332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no397_m10.g1 MSMg01no397_m10.g1 CHROMAT_FILE:
MSMg01no397_m10.g1 PHD_FILE: MSMg01no397_m10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:19 2005
         (364 letters)



>mm_chr11_18611202_18611965
          Length = 764

 Score =  696 bits (360), Expect = 0.0
 Identities = 363/364 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatgtgctttccatggacagtagctcctacagacacaaacactagtttctcataaagtcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aatgtgctttccatggacagtagctcctacagacacaaacactagtttctcataaagtcc 505

                                                                       
Query: 61  aaatttctagctctcactagaaaatgcccattcagctgaatgtaattgtcttattgaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaatttctagctctcactagaaaatgcccattcagctgaatgtaattgtcttattgaaat 445

                                                                       
Query: 121 aaagaaacataaatgttaaactgtgctcggtcacacaggaacactactatgaatgttaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaagaaacataaatgttaaactgtgctcggtcacacaggaacactactatgaatgttaaa 385

                                                                       
Query: 181 tgttaaactgtgctcaggcacacaggaacactactatgaataaagcaacacaatatcttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgttaaactgtgctcaggcacacaggaacactactatgaataaagcaacacaatatcttc 325

                                                                       
Query: 241 caggatcttctaaatatatagtaccattctttaatggccacaatttatcctgtgacttaa 300
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caggagcttctaaatatatagtaccattctttaatggccacaatttatcctgtgacttaa 265

                                                                       
Query: 301 gagacgactcataccgacaaaaatatttacaaacaacacagaaaagtttataatgtattc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagacgactcataccgacaaaaatatttacaaacaacacagaaaagtttataatgtattc 205

               
Query: 361 tgta 364
           ||||
Sbjct: 204 tgta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space:   268025
Effective search space used:   268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)