Query= MSMg01no404_o19.b1 MSMg01no404_o19.b1 CHROMAT_FILE:
MSMg01no404_o19.b1 PHD_FILE: MSMg01no404_o19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:45 2005
(459 letters)
>mm_chr11_90913643_90914501
Length = 859
Score = 841 bits (435), Expect = 0.0
Identities = 453/459 (98%)
Strand = Plus / Minus
Query: 1 caaatactgctgagtttgttcctgatttgagtttggcaactttgacctctctaatctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 caaatactgctgagtttgttcctgatttgagtttggcaactttgacctctctaatctcct 600
Query: 61 cttcctgttctaccatggcatccatcacaggcagacacaatggatgcctagttatttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 cttcctgttctaccatggcatccatcacaggcagacacaatggatgcctagttatttcca 540
Query: 121 agtaaaacagtttacccgtatgcagttcgaaactccaatttttatcctcacaattaaccc 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 agtaaaacagtttacccatatgcagttcgaaactccaatttttatcctcacaattaaccc 480
Query: 181 actgcacaaaaactgacagttagttcaactctttcagagacttgtgaaacctcaaaggta 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 479 actgcacaaaaactgacagttagttcaactctttcggagacttgtgaaacctcaaaggta 420
Query: 241 tttggatctagtcttgtctgtgattacggtcttgtcatcctttctcttcattggcctaag 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tttggatctagtcaagtctgtgattacggtcttgtcatcctttctcttcattggcctaag 360
Query: 301 aggtacatgctctgattcccactctcttttacgttagcatctgctaccaaactcacttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aggtacatgctctgattcccactctcttttacgttagcatctgctaccaaactcacttgc 300
Query: 361 aacatttttcttgggttaaaaaaatctgaccactggattgtcttcttggattggatcttt 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aacatttttcttgggttagaaaaatctgaccactggattgtcttcttggattggatcttt 240
Query: 421 atgagaaatcggaagccctgatacttgatgtttccctgt 459
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 239 atgagaaatcggaagccctgttacttgatgtttccctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_o19.g1 MSMg01no404_o19.g1 CHROMAT_FILE:
MSMg01no404_o19.g1 PHD_FILE: MSMg01no404_o19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:45 2005
(402 letters)
>mm_chr11_90679109_90679905
Length = 797
Score = 690 bits (357), Expect = 0.0
Identities = 385/397 (96%), Gaps = 5/397 (1%)
Strand = Plus / Plus
Query: 1 tccccatgtcatttagctaatagcagcagaatcaggatgtaatccagtcctgattcaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccccatgtcatttagctaatagcagcagaatcaggatgtaatccagtcctgattcaata 260
Query: 61 atccatgacctgtgcatagtagccagtctgttaagcttgcagtggtaggctctcaagcct 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atccatgacctgtgcgtagtagccagtctgttaagcttgcagtggtaggctctcaagcct 320
Query: 121 atatgattcataaatggtacaattttgctttcacattcccatgctccctgtctgtatctc 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatgattcataaatgatacaattttgctttcacattcccatgctccctgtctgtatctc 380
Query: 181 actagtttctaggtattaattatgctttccaggttccaacagtaacatcagtgtccttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actagtttctaggtattaattatgctttccaggttccaacagtaacatcagtgtccttgg 440
Query: 241 agacttaacatgagtgtcattaagatcaaattcagtatatgctcgttagagaaaggaatc 300
||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| |||
Sbjct: 441 agacttaacataagtgtcattaagatcaaattcagtatatgctcatcagagaaagggatc 500
Query: 301 ctccttagtcgatggttcccactcgtccatcttcctgaggacttgtcttatcatctgtat 360
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 501 ctccttagtcgatggttcccactcgtccgtcttcctgaggactt-----atcatctgtat 555
Query: 361 attttgagtgagtttatttaaggaataattttttttt 397
|||||||||||||||||||||||||||||||||||||
Sbjct: 556 attttgagtgagtttatttaaggaataattttttttt 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 797
Length adjustment: 9
Effective length of query: 393
Effective length of database: 788
Effective search space: 309684
Effective search space used: 309684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
