Query= MSMg01no410_e05.b1 MSMg01no410_e05.b1 CHROMAT_FILE:
MSMg01no410_e05.b1 PHD_FILE: MSMg01no410_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:57 2005
(269 letters)
>mm_chr11_89259824_89260492
Length = 669
Score = 499 bits (258), Expect = e-146
Identities = 266/270 (98%), Gaps = 4/270 (1%)
Strand = Plus / Minus
Query: 2 ggaattcaatg--ctttcctctatcctcaaccggcacctgcatgcacgtacatagaaaat 59
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ggaattcaatgcccttt--tctatcctcaaccggcacctgcatgcacgtacatagaaaat 412
Query: 60 aataaataagtctttttttttaagtacaaattgctctagtcaggtactctaatcattaac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aataaataagtctttttttttaagtacaaattgctctagtcaggtactctaatcattaac 352
Query: 120 tagaaggagaaagacactgtcaggctcctcaggaagtacccattgttacaggtattttac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tagaaggagaaagacactgtcaggctcctcaggaagtacccattgttacaggtattttac 292
Query: 180 tgtatgtttctagtggattgaatcatgaaactgccacacccaaaaaatatgtccaagtgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tgtatgtttctagtggattgaatcatgaaactgccacacccaaaaaatatgtccaagtgt 232
Query: 240 taacctttgcagcctggaattgtggtcata 269
||||||||||||||||||||||||||||||
Sbjct: 231 taacctttgcagcctggaattgtggtcata 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 669
Length adjustment: 9
Effective length of query: 260
Effective length of database: 660
Effective search space: 171600
Effective search space used: 171600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no410_e05.g1 MSMg01no410_e05.g1 CHROMAT_FILE:
MSMg01no410_e05.g1 PHD_FILE: MSMg01no410_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:57 2005
(242 letters)
>mm_chr11_89120018_89120659
Length = 642
Score = 462 bits (239), Expect = e-135
Identities = 242/243 (99%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 1 tgtagaccaaggtagcttcaagttcccagagatcccttgtctcttgggtgctgggattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tgtagaccaaggtagcttcaagttcccagagatcccttgtctcttgggtgctgggattaa 259
Query: 61 aggcctggctttttttttttt-cccagccaacagaagacatggagaatgtagtttccttg 119
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aggcctggctttttttttttttcccagccaacagaagacatggagaatgtagtttccttg 319
Query: 120 acacaggtcccagttgactgtttcaggactctgccctggggttgtgaccagagcaagtgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acacaggtcccagttgactgtttcaggactctgccctggggttgtgaccagagcaagtgt 379
Query: 180 tcagtagtccttttgcattagacggtttgtcctgccttggtcctcagtggaaggtgctgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcagtagtccttttgcattagacggtttgtcctgccttggtcctcagtggaaggtgctgg 439
Query: 240 agg 242
|||
Sbjct: 440 agg 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
