Query= MSMg01no413_e24.b1 MSMg01no413_e24.b1 CHROMAT_FILE:
MSMg01no413_e24.b1 PHD_FILE: MSMg01no413_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:57 2005
(517 letters)
>mm_chr11_88967541_88968454
Length = 914
Score = 509 bits (263), Expect = e-148
Identities = 307/323 (95%), Gaps = 7/323 (2%)
Strand = Plus / Minus
Query: 4 ggaattcaaccccagattcc-gagatgtctctctctgaacccttcccactgtatttatta 62
|||||||||||||||| ||| ||||||| |||||| ||||||||||||||||||||||||
Sbjct: 348 ggaattcaaccccaga-tcctgagatgtttctctc-gaacccttcccactgtatttatta 291
Query: 63 tatgaggccaggcaggcagcaggctccggagaagatgcttcacaaagtagcgtggctagg 122
|||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 290 tatgaggccaggcaggcagcaggctccggaaaagatgcttcataaggtagcgtggctaga 231
Query: 123 tgcaatcagcaaagagagacagaaggtcccacacgctcctgagccaggcaacctgggtta 182
|||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 230 tgcaatcagc--agagagacagaaggtcccacacgctcctgagccagacagcctgggtta 173
Query: 183 caagtctcacctctgacacagactagatggatggccttgggcaagtggcttaactcctgc 242
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 caagtctcacctctg--acagactagatggatggccttgggcaagtggcttaactcctgc 115
Query: 243 atctctcggttctcggaagatcaaaatcaaataacggtagtgtccaccattgtaaagttt 302
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 114 atctctcggttctcggaggatcaaaatcaaataacggtagtgcccaccattgtaaagttt 55
Query: 303 ggtgattaagacacacaaagctc 325
|||||||||||||||||||||||
Sbjct: 54 ggtgattaagacacacaaagctc 32
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 914
Length adjustment: 10
Effective length of query: 507
Effective length of database: 904
Effective search space: 458328
Effective search space used: 458328
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_e24.g1 MSMg01no413_e24.g1 CHROMAT_FILE:
MSMg01no413_e24.g1 PHD_FILE: MSMg01no413_e24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:57 2005
(441 letters)
>mm_chr11_88762926_88763766
Length = 841
Score = 797 bits (412), Expect = 0.0
Identities = 432/439 (98%), Gaps = 3/439 (0%)
Strand = Plus / Plus
Query: 1 tttcctcccttcaagttcaagaactaaggctgctattgtagttagggctgggtggagctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcctcccttcaagttcaagaactaaggctgctattgtagttagggctgggtggagctt 260
Query: 61 ggggaagagtggtttcgccatctataacatctagagatagaggcaggaggattgctgcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggaagagtggtttcgccatctataacatctagagatagaggcaggaggattgctgcaa 320
Query: 121 cttcaaggcccgtcttagctacataatgagtttgaggacagccaagattatatataatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcaaggcccgtcttagctacataatgagtttgaggacagccaagattatatataatga 380
Query: 181 gtcttttctcagaagaagaattaaaaagctccatctttcctagagtgtggtggaatagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcttttctcagaagaagaattaaaaagctccatctttcctagagtgtggtggaatagaa 440
Query: 241 ccagcttggcactcttttagctagaacaacatacacagccacctcctggtccagatacct 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagcttggcactctaagagctagaacaacatacacagccacctcctggtccagatacct 500
Query: 301 acccctacacctccctaaggacacagtctggcttcaaatccctccca-ttatctctgagg 359
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 501 acccctacacctccctaaggacacagtctggcttcaaatccctcccaatt-tctctgagg 559
Query: 360 ttgcctcaaagtcccaaacagagccctaccttaactgccttanaatttattattattatt 419
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 560 ttgcctcaaagtcccaaacagagccctaccttaactgccttaaaatttattattattatt 619
Query: 420 attattattatt-ttatta 437
|||||||||||| ||||||
Sbjct: 620 attattattattattatta 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
