Query= MSMg01no413_i02.b1 MSMg01no413_i02.b1 CHROMAT_FILE:
MSMg01no413_i02.b1 PHD_FILE: MSMg01no413_i02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:12 2005
(508 letters)
>mm_chr11_119615382_119616289
Length = 908
Score = 940 bits (486), Expect = 0.0
Identities = 501/506 (99%), Gaps = 2/506 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactctgtataccaggctggccttgaactcagaaatctgcctgcctctgcctcc 63
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 204 ggaattcactctgtagaccaggctggccttgaactcagaaatccgcctgcctctgcctcc 263
Query: 64 agagtgctgggattaaaggcaagggctctttttgaaaagagaaatggagaggtgaattta 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cgagtgctgggattaaaggcaagggctctttttgaaaagagaaatggagaggtgaattta 323
Query: 124 gactgtaggtcactggccattccttcctacttacagactctcca-agactctgatccaaa 182
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 324 gactgtaggtcactggccattccttcctacttacagactctc-agagactctgatccaaa 382
Query: 183 cttcagcactcttcccttgcctctgctgactcctgggtcctacacaggtgcaggggtcat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cttcagcactcttcccttgcctctgctgactcctgggtcctacacaggtgcaggggtcat 442
Query: 243 tgcctctgctcccccgagccccttttcaccaggctggctgttggcagccagctctccctt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgcctctgctcccccgagccccttttcaccaggctggctgttggcagccagctctccctt 502
Query: 303 ctccccaatgcctgtccgtgaggctgtgatctgacgcctctgcaggctccagggctctca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ctccccaatgcctgtccgtgaggctgtgatctgacgcctctgcaggctccagggctctca 562
Query: 363 cctggtccgacacgagacctggaaaccagttttctttgcacaactgtctctgcctatcta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cctggtccgacacgagacctggaaaccagttttctttgcacaactgtctctgcctatcta 622
Query: 423 tcttggcttacacagccagaacacagaacagtattttacatgtgatcttgacctccttct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tcttggcttacacagccagaacacagaacagtattttacatgtgatcttgacctccttct 682
Query: 483 ctctgccaagaggaaactttggtgat 508
||||||||||||||||||||||||||
Sbjct: 683 ctctgccaagaggaaactttggtgat 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_i02.g1 MSMg01no413_i02.g1 CHROMAT_FILE:
MSMg01no413_i02.g1 PHD_FILE: MSMg01no413_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:12 2005
(444 letters)
>mm_chr11_119814790_119815633
Length = 844
Score = 791 bits (409), Expect = 0.0
Identities = 418/421 (99%)
Strand = Plus / Minus
Query: 1 ttttacttacccacctgctcattcagtacttattaaagataccttccacatgccactaag 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttttacttatccacctgctcattcagtacttattaaagataccttccacatgccactaag 362
Query: 61 gggtgcctgcaaactcacaggagactattctatggaacacgtcccaaaaggactggggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggtgcctgcaaactcacaggagactattctatggaacacgtcccaaaaggactggggct 302
Query: 121 ttgggaaactcaccgagagatcagcagagctcaagccaagtttaatgtggcatttctgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgggaaactcaccgagagatcagcagagctcaagccaagtttaatgtggcatttctgcc 242
Query: 181 aggaggtcacaagcagggtgtcctgcagctcacccctgccctcttttaaagacaagacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggaggtcacaagcagggtgtcctgcagctcacccctgccctcttttaaagacaagacct 182
Query: 241 cactatttagccctagctggcctggaactttctatacagaccaggttgtcctggaactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cactatttagccctagctggcctggaactttctatacagaccaggttgtcctggaactca 122
Query: 301 cagagttccacctgcttctacctcttgagtgctagattaaaggtgtgtccctctaccctg 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagagttccacctgcttctgcctcttgagtgctagattaaaggtgtgtccctctaccctg 62
Query: 361 agctcaggcccaattctgtggcttcatccctgcagccaggactcactagagaagcaaagc 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 agctcaggcccaattctgtggcttcacccctgcagccaggactcactagagaagcaaagc 2
Query: 421 a 421
|
Sbjct: 1 a 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
