Query= MSMg01no414_o15.b1 MSMg01no414_o15.b1 CHROMAT_FILE:
MSMg01no414_o15.b1 PHD_FILE: MSMg01no414_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:07 2005
(423 letters)
>mm_chr11_34272303_34273124
Length = 822
Score = 781 bits (404), Expect = 0.0
Identities = 418/423 (98%), Gaps = 1/423 (0%)
Strand = Plus / Minus
Query: 1 acactagatcagacatacaggagagaaaagacgccttgattctctatttcttatcttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 acactagatcagacatacaggagagaaaagacgccttgattctctatttcttatcttctc 563
Query: 61 atatttacagtccaacataagcaggcagctcacgggactgttacctgggcaacgtgagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atatttacagtccaacataagcaggcagctcacgggactgttacctgggcaacgtgagaa 503
Query: 121 ttcaagatggagctgaggtgttcttgccttgatgttctactctgccaggctggagcataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttcaagatggagctgaggtgttcttgccttgatgttctactctgccaggctggagcataa 443
Query: 181 gcagcttacattctaaaaacagagtcctcaaagtataggattcccagataatccattaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gcagcttacattctaaaaacagagtcctcaaagtataggattcccagataatccattaca 383
Query: 241 acacgctgctcgttcttctggcagccaggcaatgctgagtgtgcttgtcggataagagcc 300
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acacgctgctcg-cctcctggcagccaggcaatgctgagtgtgcttgtcggataagagcc 324
Query: 301 tgttgtgtctgacccaggtctggatgtctgtggagctgaggagccagccactccacaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgttgtgtctgacccaggtctggatgtctgtggagctgaggagccagccactccacaggg 264
Query: 361 acctttgtgtcactgtctctggntgtgctaggctgctgtccctcatctccttgtcatgag 420
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 263 acctttgtgtcactgtctctgcttgtgctaggctgctgtccctcatctccttgtcatgag 204
Query: 421 gtg 423
|||
Sbjct: 203 gtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 822
Length adjustment: 9
Effective length of query: 414
Effective length of database: 813
Effective search space: 336582
Effective search space used: 336582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_o15.g1 MSMg01no414_o15.g1 CHROMAT_FILE:
MSMg01no414_o15.g1 PHD_FILE: MSMg01no414_o15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:07 2005
(249 letters)
>mm_chr11_34050869_34051517
Length = 649
Score = 451 bits (233), Expect = e-131
Identities = 242/245 (98%)
Strand = Plus / Plus
Query: 1 tctcccccgaggcttcagtgggatgaggaatgccacccttctgttttgctctgatgtgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 tctcccccgaggcttcagtgggatgaggaatgccacccttctgttttgctctgttgtgct 260
Query: 61 ttccccacctgagatttcagggagtttgtcctgaagggccatgccacccatccacaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccccacctgagatttcagggagtttgtcctgaagggccatgccacccatccacaaaac 320
Query: 121 acctccttcttccacagcctgtgagtgatgaggacaagaagaggctgctccatctccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctccttcttccacagcctgtgagtgatgaggacaagaagaggctgctccatctccttc 380
Query: 181 tgctccatttggccttctccgagggccgaatataggtctcctccatcttttatctgacga 240
|||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 tgctccattttgccttctccgagggccaaatataggtctcctccatcttttatctgacga 440
Query: 241 tggca 245
|||||
Sbjct: 441 tggca 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
