Query= MSMg01no416_i11.b1 MSMg01no416_i11.b1 CHROMAT_FILE:
MSMg01no416_i11.b1 PHD_FILE: MSMg01no416_i11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:10 2005
(522 letters)
>mm_chr11_51502620_51503537
Length = 918
Score = 901 bits (466), Expect = 0.0
Identities = 506/526 (96%), Gaps = 12/526 (2%)
Strand = Plus / Plus
Query: 5 gaattccttcttctcttccacagacatttagaagctactttggctaaaaatcattgactt 64
||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 197 gaattccttcttcccttaaacagacatttcgaagctactttggctaaaaatcattgactt 256
Query: 65 ctctctggggccaccgagtgactaaagataaagtttggcatttctgctttcgttttgtgt 124
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 257 ctctctggggccacagagtgactaaagataaagtttggcatttctgttttcgttttgtgt 316
Query: 125 ttgctagaaacataaacaaagcgaagtagctctacaaggcacgttctatttgtaaaaaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttgctagaaacataaacaaagcgaagtagctctacaaggcacgttctatttgtaaaaaag 376
Query: 185 gtgtttcaggatcaaaatcatggtgtcttttccccagtggctggggtccgaccttcatgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gtgtttcaggatcaaaatcatggtgtcttttccccagtggctggggtccgaccttcatgc 436
Query: 245 ttggctagttctgaaagaataagcttagaggaatgtagttaaaggtctgtattccaggca 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 437 ttggctagttctgaaagaataagcttagaggaatggagttaaaggtctgtattccaggca 496
Query: 305 gcagggaattcaggagggagaaaggatgcatgaggtttataaacaaaactttactaggtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gcagggaattcaggagggagaaaggatgcatgaggtttataaacaaaactttactaggtg 556
Query: 365 gagaagatgtttgtttgtttgtttg--------agtgaagcagctttcttttattggcgg 416
||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 557 gagaagatgtttgtttgtttgtttgtttgtttgagtgaagcagctttcttttattggcgg 616
Query: 417 tagtggagaaaatttttggaatattggccaatggcagactacctacctacctacctttga 476
||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 617 tagtgaagaaaatttttggaatattggccaatggcagactacctacctacct----ttga 672
Query: 477 tagataaataacaaaactgatttcttacatctcctttgctttggtc 522
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tagataaataacaaaactgatttcttacatctcctttgctttggtc 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 918
Length adjustment: 10
Effective length of query: 512
Effective length of database: 908
Effective search space: 464896
Effective search space used: 464896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_i11.g1 MSMg01no416_i11.g1 CHROMAT_FILE:
MSMg01no416_i11.g1 PHD_FILE: MSMg01no416_i11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:10 2005
(295 letters)
>mm_chr11_51687609_51688303
Length = 695
Score = 516 bits (267), Expect = e-151
Identities = 287/299 (95%), Gaps = 10/299 (3%)
Strand = Plus / Minus
Query: 1 tcctaacctcccctttcaactgagcccttggctcttggagttagccacaacccaactact 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 494 tcctaacctcccctttcaactgagcccttggctcttggagttagccacaacctaactact 435
Query: 61 caggtccctccaacaaggggactgtgtctgtggctggatgactcatgcacactgctccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 caggtccctccaacaaggggactgtgtctgtggctggatgactcatgcacactgctccat 375
Query: 121 cccgcaaccttgggcgggacttgggctggggaggatgccagccagctcaggctaggagct 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cccgcaatcttgggcgggacttgggctggggaggatgccagccagctcaggctaggagct 315
Query: 181 tgcatcctgttgccccaacccagccctaccagaacagagtgtactcagagctccaggaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tgcatcctgttgccccaacccagccctaccagaacagagtgtactcagagctccaggaca 255
Query: 241 aaaatctg-----tttttagagagccggctctcatttggaccgagatctgagtgatgaa 294
|||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aaaatctggaaac-----agagagccggctctcatttggaccgagatctgagtgatgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
