Query= MSMg01no417_n09.b1 MSMg01no417_n09.b1 CHROMAT_FILE:
MSMg01no417_n09.b1 PHD_FILE: MSMg01no417_n09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:51 2005
(423 letters)
>mm_chr11_17630903_17631725
Length = 823
Score = 799 bits (413), Expect = 0.0
Identities = 423/431 (98%), Gaps = 8/431 (1%)
Strand = Plus / Plus
Query: 1 attggctgtaggtttgctgtatattgtaatgaatctaatataatctctatatgaccatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attggctgtaggtttgctgtatattgtaatgaatctaatataatctctatatgaccatac 260
Query: 61 ccatgtgttttgagactaattaggtctgtgtccctggaggtaagactgctttcttcactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatgtgttttgagactaattaggtctgtgtccctggaggtaagactgctttcttcactt 320
Query: 121 cactcctcagtaggctatcccttccttgttgatattattatttttgaataatgttaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactcctcagtaggctatcccttccttgttgatattattatttttgaataatgttaaagt 380
Query: 181 gtgtattaccagcatacaaaatggtgttgtgggaatatatagataatatctatctatcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtattaccagcatacaaaatggtgttgtgggaatatatagataatatctatctatcta 440
Query: 241 tctatctatctatctatctatct--------ttatataatatacatatataatatatatg 292
||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 tctatctatctatctatctatctatctatctttatataatatacatatataatatatatg 500
Query: 293 ctagtgtaaagcaaatttgtacctccatcatcatttttatgatcttttctctttgtgtgt 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctagtgtaaagcaaatttgtacctccatcatcatttttatgatcttttctctttgtgtgt 560
Query: 353 ttacacacacacacacacacacacacacatacacacacacacacacacactcacacactc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttacacacacacacacacacacacacacatacacacacacacacacacactcacacactc 620
Query: 413 acaattgcttg 423
|||||||||||
Sbjct: 621 acaattgcttg 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_n09.g1 MSMg01no417_n09.g1 CHROMAT_FILE:
MSMg01no417_n09.g1 PHD_FILE: MSMg01no417_n09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:51 2005
(311 letters)
>mm_chr11_17837957_17838666
Length = 710
Score = 578 bits (299), Expect = e-169
Identities = 308/313 (98%), Gaps = 5/313 (1%)
Strand = Plus / Minus
Query: 1 ttttaagtcatcctgcccatccttttacacttggcctggtgagtctgtttttttgttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ttttaagtcatcctgcccatccttttacacttggcctggtgagtctgtttttttgttttt 451
Query: 61 tggtttttttttttgaaatttatacctgaccatcctcactgaaattgatactaagtgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tggtttttttttttgaaatttatacctgaccatcctcactgaaattgatactaagtgact 391
Query: 121 tgtgttatctttctaaggaaacataaaaacacttctggatagtggagatgtgctggtcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tgtgttatctttctaaggaaacataaaaacacttctggatagtggagatgtgctggtcca 331
Query: 181 gcaggctacccctctctgcctttcataccactctgctatcctcattctttagtgtctttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gcaggctacccctctctgcctttcataccactctgctatcctcattctttagtgtctttg 271
Query: 241 gaa--tttactagtatgcaaagggccacctagtttgcatgagttggcacttttcctgtct 298
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gaagg---actagtatgcaaagggccacctagtttgcatgagttggcacttttcctgtct 214
Query: 299 ccctgggatgttg 311
|||||||||||||
Sbjct: 213 ccctgggatgttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 710
Length adjustment: 9
Effective length of query: 302
Effective length of database: 701
Effective search space: 211702
Effective search space used: 211702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
