Query= MSMg01no422_i07.b1 MSMg01no422_i07.b1 CHROMAT_FILE:
MSMg01no422_i07.b1 PHD_FILE: MSMg01no422_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:59 2005
(248 letters)
>mm_chr11_90181849_90182496
Length = 648
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 1 ttccacctttccttaacaaatcatctcttaagggaccttatttccatataagataggatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccacctttccttaacaaatcatctcttaagggaccttatttccatataagataggatt 260
Query: 61 ctgggcttctgggtagattccagggagaaaaatccatagattctattaatttttaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgggcttctgggtagattccagggagaaaaatccatagattctattaatttttaaagaa 320
Query: 121 agatccccgatgcggaataacttgaatcattgcctaggcagactctaatttggggaaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatccccgatgcggaataacttgaatcattgcctaggcagactctaatttggggaaggg 380
Query: 181 acaggggtcactgtttgttttaaccaacgtgctgtcacccagctcctaacccccacaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaggggtcactgtttgttttaaccaacgtgctgtcacccagctcctaacccccacaagc 440
Query: 241 caatgtga 248
||||||||
Sbjct: 441 caatgtga 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no422_i07.g1 MSMg01no422_i07.g1 CHROMAT_FILE:
MSMg01no422_i07.g1 PHD_FILE: MSMg01no422_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:59 2005
(274 letters)
>mm_chr11_90343517_90344189
Length = 673
Score = 509 bits (263), Expect = e-149
Identities = 272/275 (98%), Gaps = 3/275 (1%)
Strand = Plus / Minus
Query: 1 gaagtaagaaacataaggagggtaattataatgagatttaaataatttacttatcatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gaagtaagaaacataaggagggtaattataatgagatttaaataatttacttatcatttc 414
Query: 61 cgtgccaataaaataaagcgtgttctcttgga-tttttttttttttaggtaaactccgca 119
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 413 cgtgccaataaaataaagcgtgttctcttggattttttttttttttaggtaaactccgca 354
Query: 120 gtatgtcttttaatttactactattatttttttaaagcagaaagcattggcaacttaact 179
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 353 gtatgtcttttaatttactactatta-ttttttaaagcagaaagcattggcaacttaact 295
Query: 180 gcttgatagttattgatctccaacaacagatctgtcaaccatttagaaaaaaataatatt 239
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 294 gcttgatagttattgatctccaacaacagatctgtcaaccatttag-aaaaaataatatt 236
Query: 240 agcctttcagatgactgcttgactccccaggtcag 274
|||||||||||||||||||||||||||||||||||
Sbjct: 235 agcctttcagatgactgcttgactccccaggtcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 673
Length adjustment: 9
Effective length of query: 265
Effective length of database: 664
Effective search space: 175960
Effective search space used: 175960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
