Query= MSMg01no423_m14.b1 MSMg01no423_m14.b1 CHROMAT_FILE:
MSMg01no423_m14.b1 PHD_FILE: MSMg01no423_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:33 2005
(525 letters)
>mm_chr11_11910257_11911183
Length = 927
Score = 975 bits (504), Expect = 0.0
Identities = 517/522 (99%), Gaps = 2/522 (0%)
Strand = Plus / Minus
Query: 4 ggaattcccttattactttattttggcctcacctgagtcactgttcttggctagccctga 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 ggaattcccttactactttattttggcctcacctgagtcactgttcttggctagccctga 666
Query: 64 cttggtggtttcctgtgtaccctgtctcttatagatcacactagatcatctctcacttgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 cttggtggtttcctgtgtaccctgtctcttatagatcacactagatcatctctcacttgc 606
Query: 124 cttgacatccttgattagccagcaagatcatctgtcactccacttgtgaataacagcact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cttgacatccttgattagccagcaagatcatctgtcactccacttgtgaataacagcact 546
Query: 184 ttagctc--tttttttgtttgtttgtttcaagagtgtttgctattctgattgcaaacatt 241
||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttagctctttttttttttttgtttgtttcaagagtgtttgctattctgattgcaaacatt 486
Query: 242 cttacagtagcttatttaaaatcgtccttgtcatcttgatgttgttgtctgttctcttct 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cttacagtagcttatttaaaatcgtccttgtcatcttgatgttgttgtctgttctcttct 426
Query: 302 ctcagttaagctgccattgtcctcattcttggtctggtgggctgttctccattgtatttt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctcagttaagctgccattgtcctcattcttggtctggtgggctgttctccattgtatttt 366
Query: 362 aggcattgcaccctgtgtctccgaatcctgattaaccttactcttagtgagcagcttccc 421
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aggcattgcaccctgtatctccgaatcctgattaaccttactcttagtgagcagcttccc 306
Query: 422 tattgacctgtagagtgcacatattgaaatattcatgattattggtacatttctggcagt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tattgacctgtagagtgcacatattgaaatattcatgattattggtacatttctggcagt 246
Query: 482 atggggtgttaggtcattagggataaggcttaagcttgctgg 523
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 atggggtgttaggtcattagggataaggcttaagcttgctgg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 927
Length adjustment: 10
Effective length of query: 515
Effective length of database: 917
Effective search space: 472255
Effective search space used: 472255
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no423_m14.g1 MSMg01no423_m14.g1 CHROMAT_FILE:
MSMg01no423_m14.g1 PHD_FILE: MSMg01no423_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:33 2005
(240 letters)
>mm_chr11_11775040_11775679
Length = 640
Score = 441 bits (228), Expect = e-128
Identities = 237/240 (98%)
Strand = Plus / Plus
Query: 1 ttcatggagtgagcaggctcagaacctgagagccaatgacatctgcttcacatcttgcct 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 ttcatggagtgagcaggctcagaacctgagagccaatgacatctgcttcaaatcttgcct 260
Query: 61 gaagcacacagctgggacacagagctctgggaaacctaggccagatgccttcagtaggga 120
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 261 gaagcacacagctgggacacagagctcagggagacctaggccagatgccttcagtaggga 320
Query: 121 actttctaagtctttactccatgtagaagaggacctcacacagggaggggtgagtagcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actttctaagtctttactccatgtagaagaggacctcacacagggaggggtgagtagcct 380
Query: 181 gtaggcaggcatgggcctatttttagcacttttgctctgcctccttgcccatcagatagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaggcaggcatgggcctatttttagcacttttgctctgcctccttgcccatcagatagg 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
