Query= MSMg01no424_d05.b1 MSMg01no424_d05.b1 CHROMAT_FILE:
MSMg01no424_d05.b1 PHD_FILE: MSMg01no424_d05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:05 2005
(580 letters)
>mm_chr11_60233482_60234461
Length = 980
Score = 590 bits (305), Expect = e-172
Identities = 311/313 (99%)
Strand = Plus / Minus
Query: 268 caagtttgtaaagtgtgaagaagttggagccctcatatactgtcagaggaaatataaaat 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 caagtttgtaaagtgtgaagaagttggagccctcatatactgtcagaggaaatataaaat 921
Query: 328 ggtgtaaccacctttaaaaccactggtagtttgctaaagtattaaacctaaagattctat 387
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 ggtgtaactacctttaaaaccactggtagtttgctaaagtattaaacctaaagattctat 861
Query: 388 aaaccccggcaactctatctctaggttatctatatttattcaagagaaacaaaaccatgt 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 aaaccccggcaactctatctctaggttatctatatttattcaagagaaacaaaaccatgt 801
Query: 448 gcacataaaaacttgcatacagctgagagtacatacatatagtcctagtacttgggacag 507
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 800 gcacataaaaacttgcatacagctgatagtacatacatatagtcctagtacttgggacag 741
Query: 508 ggaaagtaggaaggtcacttggagttaggggttcaaagctaacctaggcaatatacagag 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ggaaagtaggaaggtcacttggagttaggggttcaaagctaacctaggcaatatacagag 681
Query: 568 atgcacaccacca 580
|||||||||||||
Sbjct: 680 atgcacaccacca 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_d05.g1 MSMg01no424_d05.g1 CHROMAT_FILE:
MSMg01no424_d05.g1 PHD_FILE: MSMg01no424_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:06 2005
(534 letters)
>mm_chr11_60056741_60057668
Length = 928
Score = 951 bits (492), Expect = 0.0
Identities = 522/534 (97%), Gaps = 7/534 (1%)
Strand = Plus / Plus
Query: 1 taggtattaaacgtggaggcttacactggagctcccagcacttgagaggctgagacagga 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 taggtattaaacgtggtggcttacactggagctcccagcacttgagaggctgagacagga 261
Query: 61 ggtttgctgtgaattcaagaccagcctgggctacatattgagttccaggcaggctattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggtttgctgtgaattcaagaccagcctgggctacatattgagttccaggcaggctattca 321
Query: 121 aaaagccaggccaatataggaccagtgagattgctcagcaaataaagagacttgccacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aaaagccaggccaatataggaccagtgagattgctcagcaaataaagagacttgccacca 381
Query: 181 aggtggatgttctgcatttaatccttaaaatctacatggtagaaggaaagacccaattct 240
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aggtggatgctcggcatttaatccttaaaatctacatggtagaaggaaagacccaattct 441
Query: 241 cacaagttgtctcttttatctccatatgtgcatatacacaaactatctttctcatacata 300
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cgcaagttgtc-cttttatctccatatgtgcatatacacaaactatctttctcatacata 500
Query: 301 cacacacactaaataaataaatcattataatttaaatttatatatacatacatacacgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacacacactaaataaataaatcattataatttaaatttatatatacatacatacacgtg 560
Query: 361 aaacacttataaatatatgtcatcagctagatagattgaaaggacagacatctattctac 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaacacatataaatatatgtcatcagctagatagattgaaaggacagacatctattctac 620
Query: 421 cttagatatgcagctacagagaaaactgagacgccaaaattgtaacaactgacaggccac 480
||| | || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctt-g-ta----gctacagagaaaactgagacgccaaaattgtaacaactgacaggccac 674
Query: 481 tgaataaaagtttaattgaagtgaaatgaattatagaattattagaaaaagaaa 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tgaataaaagtttaattgaagtgaaatgaattatagaattattagaaaaagaaa 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 928
Length adjustment: 10
Effective length of query: 524
Effective length of database: 918
Effective search space: 481032
Effective search space used: 481032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
