Query= MSMg01no427_c10.b1 MSMg01no427_c10.b1 CHROMAT_FILE:
MSMg01no427_c10.b1 PHD_FILE: MSMg01no427_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:56 2005
(244 letters)
>mm_chr11_8734202_8734846
Length = 645
Score = 412 bits (213), Expect = e-119
Identities = 237/249 (95%), Gaps = 9/249 (3%)
Strand = Plus / Plus
Query: 1 tttgacttgtttgcattagtgtctggagtgcccaatccaaagcaccgagggctccatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgacttgtttgcattagtgtctggagtgcccaatccaaagcaccgagggctccatggt 260
Query: 61 ttggatgaaaacctgggtctgatagcaagtgccaaaagaagtgactaacccgggg-aggc 119
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 ttggatgaaaatctgggtctgatagcaagtgccaaaagaagtgactaacccgggggaggc 320
Query: 120 aggggagggtggcagagactctaccttttcaatgctacaagggtgattatagggatgtgg 179
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggggagggtggcatagactctaccttttcaatgctacaagggtgattatagggatgtgg 380
Query: 180 tgtttt----gagggtgaacctgacaagcctgtgagttctctagtatttcaagggaagat 235
|| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tg----agcagagggtgaacttgacaagcctgtgagttctctagtatttcaagggaagat 436
Query: 236 tctgcaaga 244
|||||||||
Sbjct: 437 tctgcaaga 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no427_c10.g1 MSMg01no427_c10.g1 CHROMAT_FILE:
MSMg01no427_c10.g1 PHD_FILE: MSMg01no427_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:56 2005
(269 letters)
>mm_chr11_8887094_8887762
Length = 669
Score = 511 bits (264), Expect = e-149
Identities = 267/268 (99%)
Strand = Plus / Minus
Query: 1 ctcattccagtggggtttctatccttacatactaattgcatgcaaagaaatgaagccatc 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ctcattccagcggggtttctatccttacatactaattgcatgcaaagaaatgaagccatc 409
Query: 61 ccttctttccctcatttcttcccctaacaagagcatctaggatcccgccaggcctttgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ccttctttccctcatttcttcccctaacaagagcatctaggatcccgccaggcctttgct 349
Query: 121 ggctcctcagtgaattgctgaggtatgggcttttcaagggattgttttttagcagccact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ggctcctcagtgaattgctgaggtatgggcttttcaagggattgttttttagcagccact 289
Query: 181 gcattaatcacatccagaatgtttgtgcctgtagtagtctctagggtgtctgtcacctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gcattaatcacatccagaatgtttgtgcctgtagtagtctctagggtgtctgtcacctgg 229
Query: 241 ccttctctagctggtttgatttcaaggg 268
||||||||||||||||||||||||||||
Sbjct: 228 ccttctctagctggtttgatttcaaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 669
Length adjustment: 9
Effective length of query: 260
Effective length of database: 660
Effective search space: 171600
Effective search space used: 171600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
