Query= MSMg01no427_g01.b1 MSMg01no427_g01.b1 CHROMAT_FILE:
MSMg01no427_g01.b1 PHD_FILE: MSMg01no427_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:14 2005
(158 letters)
>mm_chr11_55922996_55923553
Length = 558
Score = 252 bits (130), Expect = 1e-71
Identities = 148/154 (96%)
Strand = Plus / Plus
Query: 5 gaattccaggccttccccagacctgtctcaagcaaacaaccccaaagccaaaatccaaag 64
|||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggccaaccccagacctgcctcaagcaaacaaccccaaagccaaaatccaaag 264
Query: 65 tgaatggcaccttaggaatggcatgtgaagtttacaatggcctctactacaggcaatgca 124
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 265 tgaatggcaccttaggaatggcatgtgaagtttacaatggcctctacgacaggcaatgca 324
Query: 125 gacacatgtatgcagatacacacacatgtgaaca 158
|||||||||||||||||||| |||||| ||||||
Sbjct: 325 gacacatgtatgcagatacaaacacatatgaaca 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 558
Length adjustment: 8
Effective length of query: 150
Effective length of database: 550
Effective search space: 82500
Effective search space used: 82500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no427_g01.g1 MSMg01no427_g01.g1 CHROMAT_FILE:
MSMg01no427_g01.g1 PHD_FILE: MSMg01no427_g01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:14 2005
(524 letters)
>mm_chr11_56131529_56132450
Length = 922
Score = 893 bits (462), Expect = 0.0
Identities = 508/524 (96%), Gaps = 6/524 (1%)
Strand = Plus / Minus
Query: 1 agaatgcagctgcacctctgg-aaaagactgcaaagaagaaaaaaaatgtcattgagaat 59
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 571 agaatgcagctgcacctctggaaaaagactgcaaagaag-aaaaaaatgtcattgagaat 513
Query: 60 tatgtagagtggctgacaccagggtcactcatttttttttctcaacaaccactccatgaa 119
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 512 tatgtagagtgactgacaccagggtcactca-ttttttttctcaacaaccactccatgaa 454
Query: 120 aggacaaggcaggcattccctcctgcactttttaagtagagaaagtcaagacagagaact 179
|||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 453 aggacagggcaggcattccctcctgcagtttgtaagtagagaaagtcaagacagagaact 394
Query: 180 ggagggattggagtaactgacccaagtttacaaagttaaattgacttcaaactcaaggga 239
||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||
Sbjct: 393 ggagggattggagtaactgactcaagtttacaaagttaaattgacttcagactcaa-gga 335
Query: 240 aaagtgaaaaataaagtctaagtctttgttcatgatgaatctgttcttcatacccctgcc 299
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aaaatgaaaaataaagtctaagtctttgttcatgatgaatctgttcttcatacccctgcc 275
Query: 300 ctccagcctcttttccaacacaactccatattaatggggtatgtattacatgtacttcag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ctccagcctcttttccaacacaactccatattaatggggtatgtattacatgtacttcag 215
Query: 360 ataagaagtaataacagggacagcaagatggcttgataggtaagtgctcttgctgccgag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 214 ataagaagtaataacagggacagcaagatggcttgataggtaagtgctcttgctgccaaa 155
Query: 420 cttgaaaacccgaggtcaaactctgagaccaacacagttgaaggagagaaccaatccaag 479
||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 154 cttgaaaacccgaggtcaaactctgagaccaacacagttgaag--gagaaccaacccaag 97
Query: 480 caaaatgtctcctttttcatacgttgcctgttgtggacatatga 523
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 caaaatgtctcctttttcatacgttgcctgttgtggacatatga 53
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 922
Length adjustment: 10
Effective length of query: 514
Effective length of database: 912
Effective search space: 468768
Effective search space used: 468768
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
