Query= MSMg01no428_a22.b1 MSMg01no428_a22.b1 CHROMAT_FILE:
MSMg01no428_a22.b1 PHD_FILE: MSMg01no428_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:07 2005
(565 letters)
>mm_chr11_71576784_71577748
Length = 965
Score = 973 bits (503), Expect = 0.0
Identities = 509/511 (99%)
Strand = Plus / Minus
Query: 55 aagagttcatttttaataatgaagagctcccagttactttacaatccctggaactcaggt 114
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 965 aagagttcatttttaataatgaagagctcccagttactttacagtccctggaactcaggt 906
Query: 115 ccttcattgttaaagtggcgagagcactgcttacatcagtaggctctttgaagattaaat 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 ccttcattgttaaagtggcgagagcactgcttacatcagtaggctctttgaagattaaat 846
Query: 175 taaacaagacgacagatggacatctacacacaatggtgctccatacataacagatgttca 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 taaacaagacgacagatggacatctacacacaatggtgctccatacataacagatgttca 786
Query: 235 aataaataacatctattattattctgatcttatactctaacctgggacctagtgggacag 294
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 785 aataaataacatctattattattctgatcctatactctaacctgggacctagtgggacag 726
Query: 295 tgaatcagtaaatattagctgaataattagcacattaatagaagagaggaaaacaatggt 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tgaatcagtaaatattagctgaataattagcacattaatagaagagaggaaaacaatggt 666
Query: 355 ttcaacagccaggatgaaagaagtggctgactacccagcatccctgtctgaccagcaggc 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ttcaacagccaggatgaaagaagtggctgactacccagcatccctgtctgaccagcaggc 606
Query: 415 agaagaagcccccaccccagccccagtatccagcagcccccatcttggggtgcagccagg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 agaagaagcccccaccccagccccagtatccagcagcccccatcttggggtgcagccagg 546
Query: 475 gcttgagacacagatgggccctctgggttgtgggggagcagaggagccttttgtcactta 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gcttgagacacagatgggccctctgggttgtgggggagcagaggagccttttgtcactta 486
Query: 535 acataacaaatgtcttttctaaatccctgac 565
|||||||||||||||||||||||||||||||
Sbjct: 485 acataacaaatgtcttttctaaatccctgac 455
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no428_a22.g1 MSMg01no428_a22.g1 CHROMAT_FILE:
MSMg01no428_a22.g1 PHD_FILE: MSMg01no428_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:07 2005
(386 letters)
>mm_chr11_71430028_71430816
Length = 789
Score = 675 bits (349), Expect = 0.0
Identities = 378/393 (96%), Gaps = 11/393 (2%)
Strand = Plus / Plus
Query: 1 tttgctggtgggaagctagggatgtgacaaggaagggctggaggtttgcactggaatgga 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgctggtgggaagctaggggtgtgacaaggaagggctggaggtttgcactggaatgga 260
Query: 61 aaaaaaaaa----gctctcagtggataaaagggaaagaatggaagggagggaggaaagat 116
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaaaaaaaaaagctctcagtggataaaagggaaagaatggaagggagggaggaaagat 320
Query: 117 atttgagaaatagctaccagatgcatgcatatggagggcggcaggtagagagggggtagt 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttgagaaatagctaccagatgcatgcatatggagggcggcaggtagagagggggtagt 380
Query: 177 ttataagatattcagtctgtgtagagaatggacctctgcttcccctgcacacacacttca 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttataagatattcagtctgtgtagagaatggacctctgcttcccctgcacacacacttca 440
Query: 237 tggctttctcatga---tttttgcacataggttgcggttgcttttagctatattcttctg 293
||||||||||| || | ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggctttctcaggaggct----gcacataggttgcggttgcttttagctatattcttctg 496
Query: 294 ccgagctatgtttcctatgcagagactcatccacttgggatcctggttacatatcaatgc 353
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 497 ctgagctatgtttcctatgcagagactcatccacttgggatcctggttatatatcaatgc 556
Query: 354 taccacagctgggaagccctttgctgtctggtg 386
|||||||||||||||||||||||||||||||||
Sbjct: 557 taccacagctgggaagccctttgctgtctggtg 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 789
Length adjustment: 9
Effective length of query: 377
Effective length of database: 780
Effective search space: 294060
Effective search space used: 294060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
