ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGGAA
TTCTACAGCCAGATAACATGCCTGTTTGGGTTTGGATGTAAAGGGAACCA
TTTTACATTTTTTGTTAAAGAGTTGGTCCCCACCTAGGGGTGTGATTGAA
AGTGCATGGATCATGAGGGCACTAACTTCATCAACGGACTAATTGATGAG
TTCATAGTTGGATGGGTTATTAGAGTCTGGATCCTTGTACAATTAAAAAA
AATGACTTGGGGTATATATGACTTTGAATAGGAGCAAAGATCTCAGTAGC
CCTGTCTCAGAGACAGCCAAGATTATGTTATGAAAACCCACCGGCCATTT
TAATCTGACAGCTCTCTGTCCTTGGTTAACCCATCAGTGAATTTTATCAG
GTGTCTACAATGCCACAGGCACCACGCCATCTCTCCTGCTTGGAAGAATG
TAGAACTCTGGCTGGGGCCAGTGCTGGAAGAACTGTTCAATGAGGCTGGA
ATAGGATTTGCTCATAAAGCATTTTGATTCCTGAAACACAGATAAGGAAT
GTGTAGAGAGAGCCCTGGATGCGTGACACAGGTGGGATTGAGACTCACTT
GTCTCTAGTGACCAGTCCCAGAANAACTTCAGTCTTGTCTGGCCAGAAAG
GGCAGATTGGAAAATTGTCCGATTTTCTGAAGACTTTAAGACACGCCACT
GATCCGCTCACAGGATTTATTGCTCTCTTAGTAACTTTGCCTATTAAGGA
GGAGCATGACCATTTTTATTGATN

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCTGCCGNAATTCTGTGAGTGTGGCCCAGGCAAAAGGACAC
AATTTCTTATGGGAAAGGCTGGGGAAGGGGGGAGGAGATGTGGATGAATA
CAATAGCTCCTGCCAGCTTGTCGTTGATTGATTGATTGATTGACTCTTAT
CTAATTGATTTTGGCCTTCCGCCTGCCGACTATGCTGCCCTGGATCTCTT
TTTTTTTTCCCTGTCTCTTCCCTGCTCCCTGCTTCCATTCTTGTTCTCAT
TCCCTTCTCCACCATCCCTTTTTTTTTTTCCTCCGCCCCCCATCTCCCCG
CCCGATCTCTTTTTTCTCCCCCCCCCTCTCTCTTCCGTCTCTTCTCCCTT
TCGCTCTTTTTTCCTTCCTCCTTTCCTTCTTCTTTCCCCCTCCTTTTCTT
TCTTCCTCTCCTCTCTCTTTTTTTTCCCCTCCTTTTCTTCACCCTCTTCC
CTTTCTTTCCTCTCCCCCTCCTCTCTTCTTTCTCTTCTCTTTCTCTCCCT
CTCTCCTTCCTTCTTTCTCCCCTTCCCTCTTCTCCCTCCTCTCTTCTCTC
TCCTTCTCTCTTCCTCTCTCTTCTCTTTTCTTTTTTTTCCCCCTCCTCTC
CTCTCCTTCCTCCCTTTCTTCTCTTTTCCTTTCTTCCTTCTTTTCCTTTT
CCTCCCTTCCTCCCCCTCTTCTTCCCCCCCTCTTTTCTTCCTTTCTTTCC
TTTTCCTCCCCTTTTCCCTCTTTTCCTCTTCCTCTCCCACTCC

Query= MSMg01no428_d24.b1 MSMg01no428_d24.b1 CHROMAT_FILE:
MSMg01no428_d24.b1 PHD_FILE: MSMg01no428_d24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:22 2005
         (544 letters)



>mm_chr11_67605214_67606157
          Length = 944

 Score =  890 bits (460), Expect = 0.0
 Identities = 523/544 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgtttgggtttggatgtaaagggaaccattttacattttttgttaaagagttggtcccc 60
           |||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 ctgttttggtttggatataaaaggaaccatttttcattttttgttaaagagttggtcccc 260

                                                                       
Query: 61  acctaggggtgtgattgaaagtgcatggatcatgagggcactaacttcatcaacggacta 120
           |||||||||||||||||||| ||||||||||||| ||||||||||||||||||  |||||
Sbjct: 261 acctaggggtgtgattgaaaatgcatggatcatgcgggcactaacttcatcaatagacta 320

                                                                       
Query: 121 attgatgagttcatagttggatgggttattagagtctggatccttgtacaattaaaaaaa 180
           |||||||||||||||||||||||||||||||||| |||| | ||||||  ||||||||||
Sbjct: 321 attgatgagttcatagttggatgggttattagaggctgggttcttgtatgattaaaaaaa 380

                                                                       
Query: 181 atgacttggggtatatatgactttgaataggagcaaagatctcagtagccctgtctcaga 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 atgacttggggtatatatgactttgaataggagcaaagatctcagtggccctgtctcaga 440

                                                                       
Query: 241 gacagccaagattatgttatgaaaacccaccggccattttaatctgacagctctctgtcc 300
           |||||||||||| | |  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacagccaagatcaagggatgaaaacccaccggccattttaatctgacagctctctgtcc 500

                                                                       
Query: 301 ttggttaacccatcagtgaattttatcaggtgtctacaatgccacaggcaccacgccatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttggttaacccatcagtgaattttatcaggtgtctacaatgccacaggcaccacgccatc 560

                                                                       
Query: 361 tctcctgcttggaagaatgtagaactctggctggggccagtgctggaagaactgttcaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctcctgcttggaagaatgtagaactctggctggggccagtgctggaagaactgttcaat 620

                                                                       
Query: 421 gaggctggaataggatttgctcataaagcattttgattcctgaaacacagataaggaatg 480
           |||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 621 gaggctagaataggatttgctcataaagcatgttgattcctgaaacacagacaaggaatg 680

                                                                       
Query: 481 tgtagagagagccctggatgcgtgacacaggtgggattgagactcacttgtctctagtga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtagagagagccctggatgcgtgacacaggtgggattgagactcacttgtctctagtga 740

               
Query: 541 ccag 544
           ||||
Sbjct: 741 ccag 744


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space:   498756
Effective search space used:   498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)