Query= MSMg01no429_p23.b1 MSMg01no429_p23.b1 CHROMAT_FILE:
MSMg01no429_p23.b1 PHD_FILE: MSMg01no429_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:38 2005
(427 letters)
>mm_chr11_24196268_24197094
Length = 827
Score = 762 bits (394), Expect = 0.0
Identities = 412/418 (98%), Gaps = 2/418 (0%)
Strand = Plus / Plus
Query: 11 gaattcttcagcagtggctgtctgttcctccattcctctggtgcacaaggccaggtctcc 70
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gaattctttagcagtggctgtctgttcctccattcctctggtgcacaaggccaggtctcc 270
Query: 71 tgctttccagaggcacgaagggacagggcgggagtgaggcctaacaaggcttgccaatca 130
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 271 tgctttccaggggcacgaagggacagggcgggagtgaggcctaacaacgcttgccaatca 330
Query: 131 cttggagaa-agcactctctcattggctttgccttctccacgaggcatcaagctagttac 189
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cttggagaaca-cactctctcattggctttgccttctccacgaggcatcaagctagttac 389
Query: 190 acctggcccccaaatgattgattgcatcctccacatgaaagtttattgccttcttcagta 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 acctggcccccaaatgattgattgcatcctccacatgaaagtttattgccttcttcagta 449
Query: 250 aggatgaaacaaaagctcaagaacttggagacagaccacagacgtcttagcagtcagaga 309
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 450 aggatgaaacaaaagctcaagaacttggagacagaccacagacatcttagcagtcagaga 509
Query: 310 aactcacccagcatatattgtgagcaacagaaaacaaactccaggaaactcccatggggc 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aactcacccagcatatattgtgagcaacagaaaacaaactccaggaaactcccatggggc 569
Query: 370 tgcttgaccccagctcttaagtccacccactctagagtaacaaggttgtttccttcag 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tgcttgaccccagctcttaagtccacccactctagagtaacaaggttgtttccttcag 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_p23.g1 MSMg01no429_p23.g1 CHROMAT_FILE:
MSMg01no429_p23.g1 PHD_FILE: MSMg01no429_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:38 2005
(382 letters)
>mm_chr11_24367276_24368057
Length = 782
Score = 739 bits (382), Expect = 0.0
Identities = 382/382 (100%)
Strand = Plus / Minus
Query: 1 atgggtggcgccttctgctcaccacccaggttctaagctgacttcttgctttatgaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 atgggtggcgccttctgctcaccacccaggttctaagctgacttcttgctttatgaatct 523
Query: 61 cagcagggtcttgctaacagcatattggaaatgcagctttcctggcccacatggacaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 cagcagggtcttgctaacagcatattggaaatgcagctttcctggcccacatggacaggt 463
Query: 121 ttttgttctattttcgtcttttccctgttctgtttaaatatggtgtctgtgactgagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ttttgttctattttcgtcttttccctgttctgtttaaatatggtgtctgtgactgagttg 403
Query: 181 cgtgttccggaggacgtggtccagagagaaggagccagagttgcttctctgccttggcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 cgtgttccggaggacgtggtccagagagaaggagccagagttgcttctctgccttggcgc 343
Query: 241 ttaggaaagagcaaatggggctgccacctgcccggtctggggatgattccagaatggctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttaggaaagagcaaatggggctgccacctgcccggtctggggatgattccagaatggctc 283
Query: 301 aggttattcacagcacagatccacccgggggtaaaaataccatcccagaaggactctcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aggttattcacagcacagatccacccgggggtaaaaataccatcccagaaggactctcct 223
Query: 361 cctagccataaaaatacctatg 382
||||||||||||||||||||||
Sbjct: 222 cctagccataaaaatacctatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
