Query= MSMg01no430_d01.b1 MSMg01no430_d01.b1 CHROMAT_FILE:
MSMg01no430_d01.b1 PHD_FILE: MSMg01no430_d01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:55 2005
(236 letters)
>mm_chr11_75743018_75743653
Length = 636
Score = 397 bits (205), Expect = e-115
Identities = 214/217 (98%)
Strand = Plus / Plus
Query: 20 cagccttcaggtgataaataggaggatgggggaggctttgcaactctcacaggtccttga 79
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 cagccttcaggtgacaaataggaggatgggggaggctttgcaactctcacaggtccttga 279
Query: 80 tgtggctgtgtccgtgttaacaatactcattcacgcagagcatcctccgctccccacagg 139
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 280 tgtggctgtgtccgtgttaacaatactcattcactcagagcatcctccgctccccacagg 339
Query: 140 tacaaccaatttggaaaggtgtttcttacagaattaaacacacagtaattactctgcacg 199
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cacaaccaatttggaaaggtgtttcttacagaattaaacacacagtaattactctgcacg 399
Query: 200 agaaatgtttctagtcctgactcggacgcctgaaccc 236
|||||||||||||||||||||||||||||||||||||
Sbjct: 400 agaaatgtttctagtcctgactcggacgcctgaaccc 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no430_d01.g1 MSMg01no430_d01.g1 CHROMAT_FILE:
MSMg01no430_d01.g1 PHD_FILE: MSMg01no430_d01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:55 2005
(391 letters)
>mm_chr11_75807484_75808274
Length = 791
Score = 576 bits (298), Expect = e-169
Identities = 313/322 (97%), Gaps = 7/322 (2%)
Strand = Plus / Minus
Query: 1 cacatatgtatacagtgagttttgaccatattcacctcccccaactcttctgcctcacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cacatatgtatacagtgagttttgaccatattcacctcccccaactcttctgcctcacct 263
Query: 61 ctcccaatttcactctctactttctcacttcctcccaactttgtggttgtcctagaactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctcccaatttcactctctactttctcacttcctcccaactttgtggttgtcctagaactc 203
Query: 121 agtgtgtagaccaggttgtcctagaactcactctgtagaccaggctggccttaaacttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 agtgtgtagaccaggttgtcctagaactcactctgtagaccaggctggccttaaacttac 143
Query: 181 agacatctgcctgcctctacctcccaagtgccagaagtaaatgcatgcacctccacgccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 agacatctgcctgcctctacctcccaagtgccagaagtaaatgcatgcacctccacgccc 83
Query: 241 agcccattc-------ttttttttttaaattacccactgaatgcagcttgtgctgctcat 293
||||||||| |||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 82 agcccattcttttttttttttttttttaattacccactgaatgcagcttgtgctgcccat 23
Query: 294 agactcgtgggtctggtgtcat 315
||||||||||||||||||||||
Sbjct: 22 agactcgtgggtctggtgtcat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
