Query= MSMg01no431_g22.b1 MSMg01no431_g22.b1 CHROMAT_FILE:
MSMg01no431_g22.b1 PHD_FILE: MSMg01no431_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:44 2005
(398 letters)
>mm_chr11_112859424_112860222
Length = 799
Score = 673 bits (348), Expect = 0.0
Identities = 384/396 (96%), Gaps = 1/396 (0%)
Strand = Plus / Minus
Query: 4 ggaattccaggctcccttcctcctctatcattggatatggggtaggaaggaggcatcggg 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 599 ggaattccaggctcccttcctcctctatcattggatatggggtaggaaggaggcattggg 540
Query: 64 gtgtgagctccgtgttctaaatgcccggcataatttctcctcacggcacttttctgagac 123
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 539 gtgtgggctccgtgttctaaatgcccggcataatttctcctcatggcacttttctgagac 480
Query: 124 caccgttggctggtcatggctccttcagcgatcatcctctgcttgtcactgctgacctgg 183
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 caccgttggctggtcgtggctccttcagcgatcatcctctgcttgtcactgctgacctgg 420
Query: 184 catttgcctgtcaccagagtccctccagggtcaaagcatctgtctccttttctgggtgct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 catttgcctgtcaccagagtccctccagggtcaaagcatctgtctccttttctgggtgct 360
Query: 244 tcattggtcccacctctaagttcttagaacatcacctcactctctactctggttccccca 303
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tcatcagtcccacctctaagttcttagaacatcacctcactctctactctggttccccca 300
Query: 304 gctgagcaaatctcttttcttttctctgagagtggcttcattctccc-aaattctagtta 362
||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 299 gctgagcaaatctgtttgcttttctctgagagtggcttcattctcccaaaattctagtta 240
Query: 363 tccatttctaaagtgtcccttggtacccccagctca 398
|| |||||||||||||||||||| | ||||||||||
Sbjct: 239 tctatttctaaagtgtcccttggcatccccagctca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 799
Length adjustment: 9
Effective length of query: 389
Effective length of database: 790
Effective search space: 307310
Effective search space used: 307310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_g22.g1 MSMg01no431_g22.g1 CHROMAT_FILE:
MSMg01no431_g22.g1 PHD_FILE: MSMg01no431_g22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:44 2005
(361 letters)
>mm_chr11_112709976_112710738
Length = 763
Score = 629 bits (325), Expect = 0.0
Identities = 354/367 (96%), Gaps = 10/367 (2%)
Strand = Plus / Plus
Query: 1 actctgtatccctgacctgagtttgtgattttccggcctcagccttgggagtagctggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctgtatccctgacctgagtttgtgattttccggcctcagccttgggagtagctggaa 260
Query: 61 ttacacacttgggccatcaagtccagcacattaccacctcagtggtgaaaccattgatag 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacacacctgggccatcaagtccagcacattaccacctcagtggtgaaaccattgatag 320
Query: 121 ctcaaaatcgccaaacagatttcaccatgacggctttgaaggaagaacaagatgcaaaag 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcaaaatcgccaaacagacttcaccatgacggctttgaaggaagaacaagatgcaaaag 380
Query: 181 tctgatgcgaggaccaactctggctatttctctggttcactaataaagtggtcactgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgatgcgaggaccaactctggctatttctctggttcactaataaagtggtcactgaag 440
Query: 241 aagaacacactgaacactcaaaggaaaacaacttagattttt-gagagggaaaaaaatgc 299
|||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||
Sbjct: 441 aagaacacactgaacactcaaagggaaacaacttagattttttgagagg--aaaaaatgc 498
Query: 300 caactgggttactttcatgaactccgcattgacaatctctctctct----ttaaaaa-at 354
||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||
Sbjct: 499 caactgggttactttcatgaactccgcattgac--tctctctctctctctttaaaaagat 556
Query: 355 tcatttt 361
|||||||
Sbjct: 557 tcatttt 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 763
Length adjustment: 9
Effective length of query: 352
Effective length of database: 754
Effective search space: 265408
Effective search space used: 265408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
