Query= MSMg01no432_e21.b1 MSMg01no432_e21.b1 CHROMAT_FILE:
MSMg01no432_e21.b1 PHD_FILE: MSMg01no432_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:59 2005
(425 letters)
>mm_chr11_11923666_11924490
Length = 825
Score = 806 bits (417), Expect = 0.0
Identities = 423/425 (99%)
Strand = Plus / Plus
Query: 1 ttcagactgtctcccaaatgtcacctaattctaaaattcaaaagatgcactgttctctga 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcagactgtcgcccaaatgtcacctaattctaaaattcaaaagatgcactgttctctga 260
Query: 61 aatttccaaagctcagttctgggtggtaattacatgacactgagaagagtaaccggtgat 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 aatttccaaagctcagttctgggtggtaattacatgacactgagaagtgtaaccggtgat 320
Query: 121 ggaaatccttaggagagggtttaagaacaaaaataactcacattttaattctaccaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaatccttaggagagggtttaagaacaaaaataactcacattttaattctaccaatct 380
Query: 181 ggcactactcctacccccttcagactggtagtgaaattgccattaactccatctgctgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcactactcctacccccttcagactggtagtgaaattgccattaactccatctgctgcc 440
Query: 241 ttcttctaaccgttagtacgcaattcttaatactgctaggcaggagctataatccctgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcttctaaccgttagtacgcaattcttaatactgctaggcaggagctataatccctgat 500
Query: 301 ttctagtccagacatggggagtggcaagaagcacaacaggaattcagttgtaagtctaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctagtccagacatggggagtggcaagaagcacaacaggaattcagttgtaagtctaca 560
Query: 361 tggggacctcatacctatccccacaattaagtgcatagttgtgtgaaaccctaaatggga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggggacctcatacctatccccacaattaagtgcatagttgtgtgaaaccctaaatggga 620
Query: 421 agtgt 425
|||||
Sbjct: 621 agtgt 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_e21.g1 MSMg01no432_e21.g1 CHROMAT_FILE:
MSMg01no432_e21.g1 PHD_FILE: MSMg01no432_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:59 2005
(306 letters)
>mm_chr11_12004859_12005561
Length = 703
Score = 551 bits (285), Expect = e-161
Identities = 299/305 (98%), Gaps = 3/305 (0%)
Strand = Plus / Minus
Query: 1 tgttttctaatccaattagttgttgagaatgttggctaatataaagagattttgttgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgttttctaatccaattagttgttgagaatgttggctaatataaagagattttgttgaac 443
Query: 61 aacatttatcaaatcctattattgtgttgttgtggtggaattttttttatgcctacattg 120
||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||
Sbjct: 442 aacatttatcaaatcctattatt---ttgttgttgtggaattttttttacgcctacattg 386
Query: 121 atcaactgttctggaattacatattacccttgcccatttcagtgtgtttcatcttttcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atcaactgttctggaattacatattacccttgcccatttcagtgtgtttcatcttttcaa 326
Query: 181 cttgaagtcttccttctaagagctcctgtaagctatcttaatgttcataaatatctttag 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 325 cttgaagtcttccttctaagagctcctgtaagctatcttaatgatcataaatatctttag 266
Query: 241 cctatttttatgatgcaagcttttctttttcctttaaatatgaatgatagttttgtggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctatttttatgatgcaagcttttctttttcctttaaatatgaatgatagttttgtggag 206
Query: 301 tataa 305
|||||
Sbjct: 205 tataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 703
Length adjustment: 9
Effective length of query: 297
Effective length of database: 694
Effective search space: 206118
Effective search space used: 206118
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
