Query= MSMg01no433_b12.b1 MSMg01no433_b12.b1 CHROMAT_FILE:
MSMg01no433_b12.b1 PHD_FILE: MSMg01no433_b12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:05 2005
(240 letters)
>mm_chr11_66148811_66149450
Length = 640
Score = 373 bits (193), Expect = e-108
Identities = 228/241 (94%), Gaps = 4/241 (1%)
Strand = Plus / Plus
Query: 1 ggtaccatgacctatgcagcattgtttcttccttgttctt--attccgattcttcctggg 58
|||||||||||||| |||||||||||||||||||||||| || | ||||||||||||
Sbjct: 201 ggtaccatgacctacacagcattgtttcttccttgttcttacat--caattcttcctggg 258
Query: 59 gatgctgctggatacctgtagtttactaatttcacactttttagcttactataggcttta 118
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 259 gatgctgttggatacctgtagtttacaaatttcacactttttagcttactataggcttta 318
Query: 119 tgtgacatcacctctgctatctcctgtcctatacatgtttttcaactcactaatcctttc 178
|||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||
Sbjct: 319 tgtgacatcacctctgctatctcctgtcctctacatgttttccaactcactgatcctttc 378
Query: 179 ttaagtgatgcttgaactattaatttgcctgctcactgagtttttgtctgctcctttttt 238
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 379 ttaagtgatgcttgaactattaatttgtctgctcactgagtttttgtctgctcctttttt 438
Query: 239 c 239
|
Sbjct: 439 c 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_b12.g1 MSMg01no433_b12.g1 CHROMAT_FILE:
MSMg01no433_b12.g1 PHD_FILE: MSMg01no433_b12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:05 2005
(152 letters)
>mm_chr11_66335550_66336101
Length = 552
Score = 246 bits (127), Expect = 6e-70
Identities = 142/147 (96%)
Strand = Plus / Minus
Query: 1 agcgagcacacccatatccagctggttgggctccggggaggagaaagcgatgttagagct 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 347 agcgagcacacccatatccagctggttgggctccggggaggagaaggcgatgttagagct 288
Query: 61 ggatgagggtgtcccaccttccaggctggaaccccagttctattacaaggtacattcttt 120
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 287 ggatgagggtgtcccaccttccaggctggaaccccagttctattagaaggtatattcttt 228
Query: 121 tcttatttctgctttacaacttctccg 147
|||||||||||||||| ||| ||||||
Sbjct: 227 tcttatttctgctttagaacgtctccg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 152
Length of database: 552
Length adjustment: 8
Effective length of query: 144
Effective length of database: 544
Effective search space: 78336
Effective search space used: 78336
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
