Query= MSMg01no433_c17.b1 MSMg01no433_c17.b1 CHROMAT_FILE:
MSMg01no433_c17.b1 PHD_FILE: MSMg01no433_c17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:11 2005
(566 letters)
>mm_chr11_38317315_38318280
Length = 966
Score = 607 bits (314), Expect = e-178
Identities = 371/398 (93%), Gaps = 16/398 (4%)
Strand = Plus / Minus
Query: 5 gaattccatactttgcg-ggtagtgatgattagaatgctagtgtaaacattatgtaaaga 63
||||||||| ||| | | |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 397 gaattccatgcttag-gaggtagtgatgattagaatgctagtgtaaactttatgtaaaga 339
Query: 64 attccatgcttagcaggtagtgatgattagaatgctagtgtaaactttatgagcttggga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 attccatgcttagcaggtagtgatgattagaatgctagtgtaaactttatgagcttggga 279
Query: 124 ttcttaatatcggattttactctgaattactactctgattaacatttataacttgcacag 183
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 278 ttcttaatatcagattttactctgaattactattctgattaacatttataacttgcacag 219
Query: 184 gggcagcaaagta---------tgggagtacagctgaactatgcttaagatggctttttc 234
||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 218 gggcagcaaagtataggctgtctgggagtacagctgaattatgcttaagatggctttttc 159
Query: 235 tagaattccttaatttgttgac-----actatttattgatggtgtatttttgtttataga 289
||||| || ||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 158 tagaaatctttaatttgttgacacgttactatttattgatggtgtatttttgcttatagc 99
Query: 290 agtatgacatggcatgtgtataggtttcaaaagactaagtttgttctatctttctactat 349
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 98 agtatgacatggcatgtgtataggtttcaaaagactaagtttgttctatttttctactat 39
Query: 350 gtgaattccaggaatgaaacatattttccggtctggga 387
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 gtgaattccaggaatgaaacatattttccggtctggga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_c17.g1 MSMg01no433_c17.g1 CHROMAT_FILE:
MSMg01no433_c17.g1 PHD_FILE: MSMg01no433_c17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:11 2005
(524 letters)
>mm_chr11_38158353_38159277
Length = 925
Score = 986 bits (510), Expect = 0.0
Identities = 522/526 (99%), Gaps = 3/526 (0%)
Strand = Plus / Plus
Query: 1 tctcctcataatctatgcaagtttaatttaaatctcataaacacaaagctcgctaagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcctcataatctatgcaagtttaatttaaatctcataaacacaaagctcgctaagcca 260
Query: 61 gacatccccaatgcaaggccagatcatgttcatttcagaaggtcacagaatctcattttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacatccccaatgcaaggccagatcatgttcatttcagaaggtcacagaatctcattttg 320
Query: 121 gtagacacgcatcatctgcgataatgccttgattaaagtgaccccagaggggcaaatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtagacacgcatcatctgcgataatgccttgattaaagtgaccccagaggggcaaatgtg 380
Query: 181 catttgggccttggaaatgagcatatcatctcttccaaaggatcgaggcaatcagggctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catttgggccttggaaatgagcatatcatctcttccaaaggatcgaggcaatcagggctt 440
Query: 241 ccatcacttcttcccttctcctt-acagagtttgtcagagggaaaactggggctgcagat 299
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccatcacttcttcccttctcctttacagagtttgtcagagggaaaactggggctgcagat 500
Query: 300 attcattcttagtcaaagagaaatgggaaagaggaagtctgccagaagaaagaaaacccc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attcattcttagtcaaagagaaatgggaaagaggaagtctgccagaagaaagaaaacccc 560
Query: 360 tgtttaggcaaaatttcatgaatcctaataataagcaaaaatcacttagtcttatcaagc 419
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtttaggaaaaatttcatgaatcctaataataagcaaaaatcacttagtcttatcaagc 620
Query: 420 atgggagagtgttgcttcaaaataacatttgtgtacattgtctgatgtaaatttcttcaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgggagagtgttgcttcaaaataacatttgtgtacattgtctgatgtaaatttcttcaa 680
Query: 480 gaagatagaaaca-tagaaatgtgtaaggaaaatgttagggatagg 524
||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 681 gaagatagaaa-agtagaaatgtgtaaggaaaatgttagggatagg 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 925
Length adjustment: 10
Effective length of query: 514
Effective length of database: 915
Effective search space: 470310
Effective search space used: 470310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
