Query= MSMg01no433_c21.b1 MSMg01no433_c21.b1 CHROMAT_FILE:
MSMg01no433_c21.b1 PHD_FILE: MSMg01no433_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:12 2005
(222 letters)
>mm_chr11_32980558_32981179
Length = 622
Score = 393 bits (203), Expect = e-114
Identities = 212/215 (98%)
Strand = Plus / Minus
Query: 5 gaattctctggattcggctctgattgtttcatgtcctggggacgaccccacctgaaggca 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gaattctctggattgggctctgattgtttcatgtcctggggacgaccccacctgaaggca 360
Query: 65 aacccagttggtggtggtggctcagcttcaaagaaaatggctgtgcctgagaaaaaaatt 124
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 359 aacccagttggtggtggtggctcagcttcaaagaaaatgcctgtgcctgagaaaaaaatt 300
Query: 125 gtagaaactttactgtgactcatccagacctgggagggtcagcatggcataaggggcagg 184
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 299 gtagaaactttactgtgactcatccagacctgggagggtcagcatggcgtaaggggcagg 240
Query: 185 gcagggagagagacagtatggtggggaaggggagg 219
|||||||||||||||||||||||||||||||||||
Sbjct: 239 gcagggagagagacagtatggtggggaaggggagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 622
Length adjustment: 9
Effective length of query: 213
Effective length of database: 613
Effective search space: 130569
Effective search space used: 130569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_c21.g1 MSMg01no433_c21.g1 CHROMAT_FILE:
MSMg01no433_c21.g1 PHD_FILE: MSMg01no433_c21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:12 2005
(412 letters)
>mm_chr11_32803172_32803982
Length = 811
Score = 746 bits (386), Expect = 0.0
Identities = 405/416 (97%), Gaps = 9/416 (2%)
Strand = Plus / Plus
Query: 1 tgtttactccttggtgatatttctgccttttgttgtggcaaagacctgccttttactatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtttactccttggtgatatttctgccttttgttgtggcaaagacctgccttttactatg 260
Query: 61 tggttgaactgtcttcaaagactggaaaagcaagggccattccaacaaaaacctttgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggttgaactgtcttcaaagactggaaaagcaagggccattccaacaaaaacctttgctg 320
Query: 121 agctgcagtggacagaaccccaaattcaaatcaggtctgaacccttggcagtgcatgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctgcagtggacagaaccccaaattcaaatcaggtctgaacccttggcagtgcatgcag 380
Query: 181 agctgggcagtgtgagcaagtgtacagagggtgccaggaagtctcctctatgcgacaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctgggcagtgtgagcaagtgtacagagggtgccaggaagtctcctctatgcgacaggg 440
Query: 241 cactcttttt----cagagagccaactgaagaagggtcccagggcacattgcttccattg 296
||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cactc-----ggggcagagagccaactgaagaagggtcccagggcacattgcttccattg 495
Query: 297 agcctgcttagatcccagctctaccacagattccccacgggaacttacacctgccatttt 356
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 496 agcctgcttagatcccagctctaccacagattccccacgggaaattacacctgccatttt 555
Query: 357 gaatctttgagtcttcatttttccctacctgcaaaatgggtgtgtgtctgtgtgta 412
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 556 gaatctttgagtcttcatttttctctacctgcaaaatgggtgtgtgtctgtgtgta 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 811
Length adjustment: 9
Effective length of query: 403
Effective length of database: 802
Effective search space: 323206
Effective search space used: 323206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
