Query= MSMg01no434_f11.b1 MSMg01no434_f11.b1 CHROMAT_FILE:
MSMg01no434_f11.b1 PHD_FILE: MSMg01no434_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:44 2005
(557 letters)
>mm_chr11_89073570_89074526
Length = 957
Score = 1046 bits (541), Expect = 0.0
Identities = 550/553 (99%)
Strand = Plus / Plus
Query: 5 gaattcttgtagtttaccttatattgtagagaggtcctgtaacagttacctctcaccggc 64
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgtagcatagcttatattgtagagaggtcctgtaacagttacctctcaccggc 264
Query: 65 tgcttgctaggcatactacctatgtatgaagacaacaaagaggagacatgtggtccctac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcttgctaggcatactacctatgtatgaagacaacaaagaggagacatgtggtccctac 324
Query: 125 cctgtataaaatcacaggccagggatgagagttacattaaccgacaatcaagtattccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cctgtataaaatcacaggccagggatgagagttacattaaccgacaatcaagtattccca 384
Query: 185 tacattcacatcttatttaccgaatttaattgcaaattcctcaatgacatatatagctgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tacattcacatcttatttaccgaatttaattgcaaattcctcaatgacatatatagctgt 444
Query: 245 cacaaccttgcctgcagagtcaacctctcttgatttctattctggcatcaggccttgtta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cacaaccttgcctgcagagtcaacctctcttgatttctattctggcatcaggccttgtta 504
Query: 305 gtgaataagcttgggccatacatggttctctcctggctgctttaatgatatattaaggca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgaataagcttgggccatacatggttctctcctggctgctttaatgatatattaaggca 564
Query: 365 aatagtaaccttctctttcaagggttgatataagcattgcatataatgaggtgtgggagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aatagtaaccttctctttcaagggttgatataagcattgcatataatgaggtgtgggagc 624
Query: 425 catcgaacatagtaattgtcagaatgccatatgttttgttttctgggtacctgatttttt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 catcgaacatagtaattgtcagaatgccatatgttttgttttctgggtacctgatttttt 684
Query: 485 aagttctagtttttaaatcacccttattgctctcttatgttagagatgtgattaactgat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aagttctagtttttaaatcacccttattgctctcttatgttagagatgtgattaactgat 744
Query: 545 gatttcagaagca 557
|||||||||||||
Sbjct: 745 gatttcagaagca 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no434_f11.g1 MSMg01no434_f11.g1 CHROMAT_FILE:
MSMg01no434_f11.g1 PHD_FILE: MSMg01no434_f11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:44 2005
(377 letters)
>mm_chr11_89244371_89245146
Length = 776
Score = 683 bits (353), Expect = 0.0
Identities = 371/379 (97%), Gaps = 5/379 (1%)
Strand = Plus / Minus
Query: 1 ttcaccaaggccaggagccaagcctagatacctcctgagagtttgttcatggaagagggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ttcaccaaggccaggagccaagcctagatacctcctgagagtttgttcatggaagagggt 517
Query: 61 aggataggtgggtaggaaagaaaccaacaacatatggggcaccttctgggtaccactgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aggataggtgggtaggaaagaaaccaacaacatatggggcaccttctgggtaccactgaa 457
Query: 121 ccttctgtccactttctgggtgagcagcattatcacctatgttttatcaaaggaaactgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ccttctgtccactttctgggtgagcagcattatcacctatgttttatcaaaggaaactgg 397
Query: 181 tccttgaacagggaaattgcatacctggtatctcagagccagtgaaagaacgagaggagt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gccttgaacagggaaattgcatacctggtatctcagagccagtgaaagaacgagaggagt 337
Query: 241 tcgtgtt--ctttttctgaagtctgcctcccgttcttttgtgaggtccctccacaacagc 298
||||||| | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tcgtgttcac---tgctgaagtctgcctcccgttcttttgtgaggtccctccacaacagc 280
Query: 299 ggttctcagcctgtgaggtcatgactcctttggcagacctacctctccaaaaatatttac 358
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 279 ggttctcagcctgtgaggtcatgactcctttggcagacctacatctccaaaaatatttac 220
Query: 359 attactattcataacagta 377
|||||||||||||||||||
Sbjct: 219 attactattcataacagta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 776
Length adjustment: 9
Effective length of query: 368
Effective length of database: 767
Effective search space: 282256
Effective search space used: 282256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
