Query= MSMg01no437_b21.b1 MSMg01no437_b21.b1 CHROMAT_FILE:
MSMg01no437_b21.b1 PHD_FILE: MSMg01no437_b21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:23 2005
(544 letters)
>mm_chr11_87770043_87770986
Length = 944
Score = 996 bits (515), Expect = 0.0
Identities = 531/541 (98%), Gaps = 8/541 (1%)
Strand = Plus / Plus
Query: 4 ggaattctgggagataggcacagaaaaatttgccacccagtctctgaggaaatcagacgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgggagataggcacagaaaaatttgccacccagtctctgaggaaatcagacgt 263
Query: 64 gtaaaactaggagaggtaactaaccagccatgtggcagacatagactagaaaatatgagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtaaaactaggagaggtaactaaccagccatgtggcagacatagactagaaaatatgagt 323
Query: 124 tatataagtcatgagctagttggggaacaaggccaagctgtggctgaggtatttattcat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tatataagtcatgagctagttggggaacaaggccaagctgtggctgaggtatttattcat 383
Query: 184 atataaataaacctctgggtcattatttgggaactggaacacggatggaaaagcccacag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atataaataaacctctgggtcattatttgggaactggaacacggatggaaaagcccacag 443
Query: 244 ttatagcttgccccacgtatttctccagttctcagattttcagtatttagggcccagcct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttatagcttgccccacgtatttctccagttctcagattttcagtatttagggcccagcct 503
Query: 304 agattttggcagttcatttcacaatggaaatggagttctctggtactatctcggagattt 363
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 504 agattttggcagttcatttcacaatggaaatggagttttctggtactatctcggggattt 563
Query: 364 gcctttctaacgccttctatttattctctctatctcatcccatccatccatccatccatc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gcctttctaacgccttctatttattctctctatctcatcccatccatccatc-------- 615
Query: 424 tctcctgcttttctcgctctcttcttcctttcagggtctctgaaagatagaagatatgag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tctcctgcttttctcgctctcttcttcctttcagggtctctgaaagatagaagatatgag 675
Query: 484 ccggtgctcctgcagtagaaagtatagtctgtcctaaagagagaggagagcagttcagga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ccggtgctcctgcagtagaaagtatagtctgtcctaaagagagaggagagcagttcagga 735
Query: 544 c 544
|
Sbjct: 736 c 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_b21.g1 MSMg01no437_b21.g1 CHROMAT_FILE:
MSMg01no437_b21.g1 PHD_FILE: MSMg01no437_b21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:23 2005
(290 letters)
>mm_chr11_87846026_87846715
Length = 690
Score = 528 bits (273), Expect = e-154
Identities = 283/287 (98%), Gaps = 2/287 (0%)
Strand = Plus / Minus
Query: 1 cagaacagccagggctacacagagaaactctagcttgaaaagaaacaaacagagagacct 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 534 cagaacagccagggctacacagagaaactctagcttgaaaagaa--aaacagaaagacct 477
Query: 61 aaaacgttcttttcagtcaagttctgaaagcctgggtgcatccctgcatggtaccctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aaaacgttcttttcagtcaagttctgaaagcctgggtgcatccctgcatggtaccctggg 417
Query: 121 agaggggagggagttgttcctgtttcctgggagcatccccaggggatggtgtgagaaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agaggggagggagttgttcctgtttcctgggagcatccccaggggatggtgtgagaaggt 357
Query: 181 ggcaggtaacaagggctcctcttctcaaagtgcagactgaaacattgctggagacttcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ggcaggtaacaagggctcctcttctcaaagtgcagactgaaacattgctggagacttcca 297
Query: 241 gaaggaagagctgatctatgagctggtttgaaaacttgggccgtgca 287
|||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 296 gaaggaagagctgagctatgagctggtttgaaaacttgggccgtgca 250
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
