Query= MSMg01no439_p17.b1 MSMg01no439_p17.b1 CHROMAT_FILE:
MSMg01no439_p17.b1 PHD_FILE: MSMg01no439_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:14 2005
(506 letters)
>mm_chr11_93528782_93529687
Length = 906
Score = 737 bits (381), Expect = 0.0
Identities = 423/451 (93%), Gaps = 24/451 (5%)
Strand = Plus / Minus
Query: 5 gaattcctatgatgttactgtctatcttgtgttgtgagttggtggtagcttttcagaccc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 gaattcctatgatgttactgtctatcttgtgttgtgagttggtggtagcttttcagaccc 763
Query: 65 catgagtactgagagtgagtaggtccaagggatgctttgctcctcctcctcctcctcttc 124
||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 762 catgagtaccgagagtgagtaggtccaagggatgctttg------------------ttc 721
Query: 125 ctcctcctcttcctcttcctcttcctcctcctctttctcttcctcttcctcctcctcctc 184
||||||||||||||| |||||||||||||| ||||| |||| ||||||||||||||
Sbjct: 720 ctcctcctcttcctcctcctcttcctcctc--ctttc----cctcctcctcctcctcctc 667
Query: 185 cctctcttcctttgtctgagcaaacccctttgaactatcacttgtgatgcaaatgctcat 244
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 cttctcttcctttgtctgagcaaacccctttgaactatcacttgtgatgcaaatgctcat 607
Query: 245 agaaaagagacagcaacataaacatgccttttgagctattgtttttggaacacaacctta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 agaaaagagacagcaacataaacatgccttttgagctattgtttttggaacacaacctta 547
Query: 305 taggccctggtcacatacatttacctctctgtctactttctcagcttcacaaaagcaaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 taggccctggtcacatacatttacctctctgtctactttctcagcttcacaaaagcaaga 487
Query: 365 aaatgaaccaagtacctaccaggttcagagaattatgctggatgctcaggatactgagat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aaatgaaccaagtacctaccaggttcagagaattatgctggatgctcaggatactgagat 427
Query: 425 aaataacgttaacagaatgcccatgagggtg 455
|||||||||||||||||||||||||||||||
Sbjct: 426 aaataacgttaacagaatgcccatgagggtg 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_p17.g1 MSMg01no439_p17.g1 CHROMAT_FILE:
MSMg01no439_p17.g1 PHD_FILE: MSMg01no439_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:14 2005
(241 letters)
>mm_chr11_93358590_93359230
Length = 641
Score = 451 bits (233), Expect = e-131
Identities = 239/241 (99%)
Strand = Plus / Plus
Query: 1 ttcagggcaccagggaagaacaatggaatggctgagagcaagtgtgttaaaataattcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcagggcaccagggaagaacaatggaatggctgagagcaagtgtgttaaaataattcat 260
Query: 61 ttccattcttcatctcagctgtggaatcactccccagatcaagacagggagcttgtcttt 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 ttccattcttcatctcagctgtggaatcgctccccagatcaagacagggagcttgtcttt 320
Query: 121 gacagtgctagaggccaaagtctggagttccaggtagcaagcttacccggactgggcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacagtgctagaggccaaagtctggagttccaggtagcaagcttacccggactgggcagg 380
Query: 181 gtggcctttgagaagcctggcaaacaggaattgagatcctgatgctgaccatgcacagaa 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 gtggcctttgagaagcctggcaaacaggaattgagatcccgatgctgaccatgcacagaa 440
Query: 241 t 241
|
Sbjct: 441 t 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
