Query= MSMg01no440_c23.b1 MSMg01no440_c23.b1 CHROMAT_FILE:
MSMg01no440_c23.b1 PHD_FILE: MSMg01no440_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:32 2005
(501 letters)
>mm_chr11_64725225_64726125
Length = 901
Score = 567 bits (293), Expect = e-166
Identities = 308/313 (98%)
Strand = Plus / Minus
Query: 189 attgctgaagatgtgtcagggtgaccagatatcaccagggccaagtgtaaggggactggg 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 attgctgaagatgtgtcagggtgaccagatatcaccagggccaagtgtaaggggactggg 842
Query: 249 ggagaggagtctggtgggcagtcgaccagacggcagggtgtgcctggctgaagggatgca 308
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 841 ggagaggagtctagtgggcagtcgaccagacggcagggtgggcctggctgaagggatgca 782
Query: 309 ggaggattctttgctagaactggggtttcccaggatagggcctggaggcctaggatccca 368
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ggagggttctttgctagaactggggtttcccaggatagggcctggaggcctaggatccca 722
Query: 369 ctaagttttggtcaggcagattctcacactcaactgctaattttttgaagacataaaaag 428
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctaagttttggtcacgcagattctcacactcaactgctaattttttgaagacataaaaag 662
Query: 429 atgaaagataatttgccaagaaaatgatgactactgctcaccagtgagtcagcagtcaac 488
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 661 atgaaagataatttgccaagaaaatgatgactactgctcaccagtgagtcagcagtcagc 602
Query: 489 atctacttttaca 501
|||||||||||||
Sbjct: 601 atctacttttaca 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_c23.g1 MSMg01no440_c23.g1 CHROMAT_FILE:
MSMg01no440_c23.g1 PHD_FILE: MSMg01no440_c23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:32 2005
(448 letters)
>mm_chr11_64593469_64594316
Length = 848
Score = 716 bits (370), Expect = 0.0
Identities = 421/448 (93%), Gaps = 17/448 (3%)
Strand = Plus / Plus
Query: 1 attacaaaatattttagggttgaagatttcaagtaaaacaaacaaacaaacaaacaaacc 60
|||||||| ||| ||||||||||||||||||| ||||| ||||||||||||
Sbjct: 211 attacaaactatcttagggttgaagatttcaaataaaa----------aacaaacaaacc 260
Query: 61 tgacatttgtaacttggtctgagactcaggtccccgagttctgggagacttgacccagga 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 tgacatttgtaacttggtctgagactcaggcccccgagttctgggagacttgacccagga 320
Query: 121 ttactctgactgttgcattgcgaataatggccagtcctcccagcaggccgtgcttttagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttactctgactgttgcattgcgaataatggccagtcctcccagcaggccgtgcttttagc 380
Query: 181 tttctttctcaagagtttgtgtttagaggagaattttgctgttctgcacgattttacttt 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttctttctcaagagtttgtgcttagaggagaattttgctgttctgcacgattttacttt 440
Query: 241 gagatagatctctcaaatattctcaaattctccatgaagcctaggatacccttcagaaca 300
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 441 gagatagatctctcaaatattctcaaattctccatgtagcctaggatacccttcagtaca 500
Query: 301 ccatgctgacttagcaacccatgctctgagatttcaaatgtgaaggccacacccagctct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccatgctgacttagcaacccatgctctgagatttcaaatgtgaaggccacacccagctca 560
Query: 361 agtctcggaccttcagagttcagagcctcgcccattctgcttttagtatcagagctgccg 420
| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 aatctcggaccttcagag-------cctcgcccattctgcttttagtatcagagctgccg 613
Query: 421 aatgtcagagatgatggcttgttggcaa 448
|||| |||||||||||||||||||||||
Sbjct: 614 aatgccagagatgatggcttgttggcaa 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
