NTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACGAGATCGCGAA
NTCATTTCGNCTGCATTGATGGCTTAAGAATAAGGAATGTGAGCAGGANT
GAAGAGAGANNNATGGCNCGGGNNGTTTCGACGTCCCGATGGGCGTTCCC
CATACTTCAGAGGACTTTGAAGGNGGAAAAAGGGAACGTGAAACCTCGAA
TAGGGGAAAACCGAATTTGGTTTCTTCACCGCCCAAAAAAAAAAAAAAAC
CGGGGGAATTTCCTGGAAAGGACCTTGGGGGGGGAAAAAGACCCCCCGGG
GGGGGGGGGGCCCCCCCAAAAAAAAAACGGGGGGAGGGGGGGGCCCCACA
CCCCTCCAAAAAATTTGTTAAAAAAGGGGGAAATAATTTTTTCCCCCCCC
GGGGGGGGGTGTCCCCCCCACAGGGGGGGGGGGGGGGGGGGGGGGGGGGG
NGGGGNNNNNAAANNANNANNAANNNNAANNNNNNATAAAATAANAAAAT
ANTAATNNATATANTANATAATTATAAAAATAATATATTAATAAAATATT
AAATATTATTATTAAANTAATTNTATTTAAATTATTTAAATAAATTTATT
ATATTTTATATTTTTAATATTTTAATAATTATAATTAATTATTTTAAATA
TTAATATTAATATTTTACTTTTTATTTATCCATCTCGCACGGGGGCGTG

NAAAATTTCCGATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTATAGGAAATGTGT
CCTTCATGGAAAGTTGTTTGCTGAACCATCTCATTGGCCCTCTCTTTCCT
TCTTTTATAGAACATGTTTGGAACCTTGAGAGATGGGTTACTGGTTAGGA
GTATTTGCTTCTTCATTCTCAGTGCTGCTAAAACTAACAGACTAAAGGGA
TGAGCCTTCTTCTGGCCATAGTGGGTAGATGCAGTTACAATCACATCATC
TTAGGGTTCCATTGCTGCAAAGAGACACCATGACCAGGACAACTACTATT
GAGGCAAATATTTAGGTAAATATTTTATTGGACCTGACTTACAGTTTCAG
AGGTTTGGTCCATTATCATCATGATGGGAAGCATGACACTGTGCAGTCAG
ACTTGGTTCTGGAGGAGCCAAAAGTTCTAAATCTGAAGGTAGCCAAGAGG
AGACACACTGCCTCCAACAAGACCACATCTTCTAATAGTGTGAATGACTC
CCCATGGGCCAAGCACATAAATTTGTGAGTCTGTGGGCCATTCCTTTTCA
AACACTATAAAATACACCCTACCCTCACACTGCGCATTACTACTTACTTT
TTTATCTAACCAAAATTTTATTCTTAAGAAACAATTATGGCTATGGGGAG
GGTGGAGGAAATTACCCCCAAGCCCCAAAATTGGTACTTGTTTTCAGCG

Query= MSMg01no440_e24.g1 MSMg01no440_e24.g1 CHROMAT_FILE:
MSMg01no440_e24.g1 PHD_FILE: MSMg01no440_e24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:43 2005
         (409 letters)



>mm_chr11_40744343_40745151
          Length = 809

 Score =  748 bits (387), Expect = 0.0
 Identities = 399/403 (99%)
 Strand = Plus / Plus

                                                                       
Query: 3   tataggaaatgtgtccttcatggaaagttgtttgctgaaccatctcattggccctctctt 62
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 203 tataggaaatgtgtccttcatggaaagttgtttgctgagccatctcattggccctctctt 262

                                                                       
Query: 63  tccttcttttatagaacatgtttggaaccttgagagatgggttactggttaggagtattt 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tccttcttttatagaacatgtttggaaccttgagagatgggttactggttaggagtattt 322

                                                                       
Query: 123 gcttcttcattctcagtgctgctaaaactaacagactaaagggatgagccttcttctggc 182
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggttcttcattctcagtgctgctaaaactaacagactaaagggatgagccttcttctggc 382

                                                                       
Query: 183 catagtgggtagatgcagttacaatcacatcatcttagggttccattgctgcaaagagac 242
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 catggtgggtagatgcagttacaatcacatcatcttagggttccattgctgcaaagagac 442

                                                                       
Query: 243 accatgaccaggacaactactattgaggcaaatatttaggtaaatattttattggacctg 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 accatgaccaggacaactactattgaggcaaatatttaggtaaatattttattggacctg 502

                                                                       
Query: 303 acttacagtttcagaggtttggtccattatcatcatgatgggaagcatgacactgtgcag 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 acttacagtttcagaggtttggtccattatcatcatgatgggaagcatgacactgtgcag 562

                                                      
Query: 363 tcagacttggttctggaggagccaaaagttctaaatctgaagg 405
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ccagacttggttctggaggagccaaaagttctaaatctgaagg 605


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space:   320000
Effective search space used:   320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)