Query= MSMg01no440_o22.b1 MSMg01no440_o22.b1 CHROMAT_FILE:
MSMg01no440_o22.b1 PHD_FILE: MSMg01no440_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:32 2005
(442 letters)
>mm_chr11_119467031_119467872
Length = 842
Score = 764 bits (395), Expect = 0.0
Identities = 431/443 (97%), Gaps = 3/443 (0%)
Strand = Plus / Plus
Query: 1 aattcacttttaaat-gtccctagtgatcaagctcagagtttgtgcacgctaagcaacac 59
|||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aattcactcttaaatggt-cctagtgatcaagctcagagtttgtgcacgctaagcaacac 260
Query: 60 tctacaaactgagctacatctccagccttattattaaagtgttttttttttttttctttt 119
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 261 tctacaaactgagctacatctccagccttattattaaagtg-tttttttctttttctttt 319
Query: 120 gccaggagatagatggtgacacacacctttagttccagtccttgggaggcagaggcaggt 179
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gccaggagatagatggtggcacacacctttagttccagtccttgggaggcagaggcaggt 379
Query: 180 gtatctctgtgagttcgaggccagtctggtctacagagtgaattccaggacatccaggtg 239
| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 380 ggatctctgtgagttcgaggccaatctggtctacagagtgagttccaggacatccaggtg 439
Query: 240 tctacacagtgaaacctatctctgcctctgcctcctgagtactgggatatgaaggcttga 299
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 440 tctacacagtgaaacctatctctgcctctgcctcctgagtacttggatatgaaggcttga 499
Query: 300 gctactaccacccagcatactaacttagttttaaaacgtattttatttatgattacttat 359
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 500 gccactaccacccagcatactaacttagttttaaaatgtattttatttatgattacttat 559
Query: 360 tagtgttctgtctagtatccttgttactggtttctaaaattgtgtcaccaaagttgactg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tagtgttctgtctagtatccttgttactggtttctaaaattgtgtcaccaaagttgactg 619
Query: 420 acaagctcttaggaggtttttgc 442
|||||||||||||||||||||||
Sbjct: 620 acaagctcttaggaggtttttgc 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_o22.g1 MSMg01no440_o22.g1 CHROMAT_FILE:
MSMg01no440_o22.g1 PHD_FILE: MSMg01no440_o22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:32 2005
(404 letters)
>mm_chr11_119653493_119654295
Length = 803
Score = 762 bits (394), Expect = 0.0
Identities = 400/402 (99%), Gaps = 1/402 (0%)
Strand = Plus / Minus
Query: 1 atttaaaacctacttatcttctagggccccatctccaaatactagggcttcaactaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atttaaaacctacttatcttctagggccccatctccaaatactagggcttcaactaagaa 542
Query: 61 ctcttaaggcacataattcagcccacagcatccagaccaggagatgacagagacacagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctcttaaggcacataattcagcccacagcatccagaccaggagatgacagagacacagag 482
Query: 121 cagaatacctaaaaaaaaaaaaaaatgcccatgcacatactaaggtaaaactgtcaaagc 180
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagaatacct-taaaaaaaaaaaaatgcccatgcacatactaaggtaaaactgtcaaagc 423
Query: 181 tggtgagagaaaccttaaaaacactgaaaggaaaatatgcagggggagaaaggccacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tggtgagagaaaccttaaaaacactgaaaggaaaatatgcagggggagaaaggccacaca 363
Query: 241 gtcagcacaggtcagagctgcctcctcctcccccaaactacaaactgacagaaagacaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gtcagcacaggtcagagctgcctcctcctcccccaaactacaaactgacagaaagacaga 303
Query: 301 ccgacaagcatggtggtggcagacagtagccaaggcctccaaggcactgagtagcaggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ccgacaagcatggtggtggcagacagtagccaaggcctccaaggcactgagtagcaggca 243
Query: 361 tgaagtcacttggaagggcagtcctggctgaggtcagtgaag 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgaagtcacttggaagggcagtcctggctgaggtcagtgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 803
Length adjustment: 9
Effective length of query: 395
Effective length of database: 794
Effective search space: 313630
Effective search space used: 313630
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
