Query= MSMg01no441_a19.b1 MSMg01no441_a19.b1 CHROMAT_FILE:
MSMg01no441_a19.b1 PHD_FILE: MSMg01no441_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:42 2005
(529 letters)
>mm_chr11_59425421_59426352
Length = 932
Score = 932 bits (482), Expect = 0.0
Identities = 516/530 (97%), Gaps = 7/530 (1%)
Strand = Plus / Plus
Query: 5 gaattcctccttgtcc--accagcatcttagaacgctggggcttcaggaagcttgaaaat 62
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctccttg--cagaccagcatcttagaacgctggggcttcaggaagcttgaaaat 262
Query: 63 caacatgtctcatatttgtgagacattttgc---tttttttttgtccctcccgtgtgcca 119
||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||
Sbjct: 263 caacatgtctcatatttgtgagacattttgctcttttttttttttccttcctgtgtgcca 322
Query: 120 taattttcagaaaaactccacacaatgaaagctactttgggtctcttaggcaatgtcact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 taattttcagaaaaactccacacaatgaaagctactttgggtctcttaggcaatgtcact 382
Query: 180 tgaatcactaggtcacaaggtgagaccaaatctttagcttttcagaagtcagaacattta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgaatcactaggtcacaaggtgagaccaaatctttagcttttcagaagtcagaacattta 442
Query: 240 ggaccatgggctcttagtttcctggaagcatagttagtcattgtgagtaacttgaatgtc 299
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 443 ggaccatgggctcttagtttcctggaagcatagttagtcactgtgagtaacttgaatgcc 502
Query: 300 aacgtgtgcctcattccctttccacctgtaactcgtggcacaagatcataagaacaatag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aacgtgtgcctcattccctttccacctgtaactcgtggcacaagatcataagaacaatag 562
Query: 360 cctaggtttttatgcaactgatctttgatgattgaaacatggacatggggtgaggaaatg 419
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 563 cctaggtttttatgcaactgatctttgatgactgaaacatggacatggggtgaggaaatg 622
Query: 420 ggagatccaagcaaactacttgaaacaatttcacaaaaatgaaaaggtgattgtatcaag 479
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ggagatccaagcaaacttcttgaaacaatttcacaaaaatgaaaaggtgattgtatcaag 682
Query: 480 tttttgaaaatcactgcaatgttagaagactctgggaaagtgacttttta 529
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tttttgaaaatcactgcaatgttagaagactctgggaaagtgacttttta 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 932
Length adjustment: 10
Effective length of query: 519
Effective length of database: 922
Effective search space: 478518
Effective search space used: 478518
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_a19.g1 MSMg01no441_a19.g1 CHROMAT_FILE:
MSMg01no441_a19.g1 PHD_FILE: MSMg01no441_a19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:42 2005
(459 letters)
>mm_chr11_59625980_59626838
Length = 859
Score = 712 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Minus
Query: 92 tactaatggatacaacctaaggcgttttgcatcctaaccaagcattctcccagctaagcc 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 tactaatggatacaacctaaggcgttttgcatcctaaccaagcattctcccagctaagcc 800
Query: 152 acatatccagcccctggttggcgtttgttttgtttactttgtgagacaatgtttcccatc 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 acatatccagcccctggttggcgtttgttttgtttactttgtgagacaatgtttcccatc 740
Query: 212 caagtactgaccaggcctgactgcttagctcccgagatgagatgagaccagggcgtgttc 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 caagtactgaccaggcctgactgcttagctcccgagatgagatgagaccagggcgtgttc 680
Query: 272 tggatggtatggccatagactaagacagtgtctcgtgttacccaggctaggctcagattt 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tggatggtatggccatagactaagacagtgtctcgtgttacccaggctaggctcagattt 620
Query: 332 cacccctgctcctcctgcctccatgtgcccatccatactgatggcaaaagtagcattaag 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 cacccctgctcctcctgcctccatgtgcccatccatactgatggcaaaagtagcattaag 560
Query: 392 gcagagcgtgaagctttaatctcggtacccaggaggcagaagtaaggggatttctaaggg 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gcagagcgtgaagctttaatctcggtacccaggaggcagaagtaaggggatttctaaggg 500
Query: 452 tttgaggc 459
||||||||
Sbjct: 499 tttgaggc 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
