Query= MSMg01no441_d24.b1 MSMg01no441_d24.b1 CHROMAT_FILE:
MSMg01no441_d24.b1 PHD_FILE: MSMg01no441_d24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:58 2005
(481 letters)
>mm_chr11_63394760_63395639
Length = 880
Score = 855 bits (442), Expect = 0.0
Identities = 469/478 (98%), Gaps = 1/478 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaggtgaccctttaagtccagggtcagatgggtcactgccaaacccaggtggaa 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggaattcaggtgacccgttaagtccagggtcagatgggtcactgccaaacccaggtggaa 621
Query: 64 acaagaacagagcacctgactgtgccggtattggaaagttgtaccagattcatgattcat 123
|||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 620 acaagaacagagtacctgactgtgccggtattagaaagttgtaccagattcatgattcat 561
Query: 124 ctctgttggcaaattcacttcagtgttatagtagccactcttcaagatgtaccttgtata 183
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 560 ctctgctggcaaattcacttcagtgttatagtagccactcttcaagatgcaccttgtata 501
Query: 184 tttagagttttgagaatattttgttcatatgagctgagcacatttgctttcacatatttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttagagttttgagaatattttgttcatatgagctgagcacatttgctttcacatatttg 441
Query: 244 caaacactgaaagcaaatacctaaaataagaactttttaaaaacctatctttctagacct 303
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 caaacaccggaagcaaatacctaaaataagaactttttaaaaacctatctttctagacct 381
Query: 304 aatgttttccaagataactgtacggaggttacttcctaacagcagaaaagttgtggtata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aatgttttccaagataactgtacggaggttacttcctaacagcagaaaagttgtggtata 321
Query: 364 ggtgacaaggagcttgcctttccttctctgcctctgtgatgggtagcagctgagccagag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggtgacaaggagcttgcctttccttctctgcctctgtgatgggtagcagctgagccagag 261
Query: 424 aaaggccctggcacccttggctgctgtcaccctggtgccccacagaagcagtgcattc 481
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 260 aaaggccctggcacctttggctgctgtcacc-tggtgccccacagaagcagtgcattc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 880
Length adjustment: 10
Effective length of query: 471
Effective length of database: 870
Effective search space: 409770
Effective search space used: 409770
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_d24.g1 MSMg01no441_d24.g1 CHROMAT_FILE:
MSMg01no441_d24.g1 PHD_FILE: MSMg01no441_d24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:58 2005
(422 letters)
>mm_chr11_63237900_63238720
Length = 821
Score = 716 bits (370), Expect = 0.0
Identities = 410/430 (95%), Gaps = 14/430 (3%)
Strand = Plus / Plus
Query: 1 aggtttgccttagatggca------tttttttttggtgttttgttttgtttt-gttctgt 53
||||||||||||||||||| ||||||||||||||||||||||||||| ||| | |
Sbjct: 194 aggtttgccttagatggcatttttttttttttttggtgttttgttttgttttggtttttt 253
Query: 54 tttggttttttttttttgcaaacacactctctttctcgaggctggagtttattttttttc 113
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tttttttttttttttttgcaaacacactctctttctcgaggctggagtttattttttttc 313
Query: 114 tgagctcccattgaaatgtcaccagtttaacctcattagaaaaagtcatatttacagcac 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tgagctcccattgaaatgtcaccagtttaacctcattagaaaaagtcatatttacagcac 373
Query: 174 ataactgagggctaaggggaaataggtctctaacaccggcagatagtccaacttccagca 233
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 374 ataactgagggctaaggggaaataggtctctaacaccagcagatagtccaacttccagca 433
Query: 234 gttcacatattcattcttgtttt---ctgctgacccctcatgagcaaagatggtaacagt 290
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 434 gttcacatattcattcttg----ggcctgctgacccctcatgagcaaagatggtaacagt 489
Query: 291 taataaatcaaatcatgggctggagagatggctcagtggttaagagcactgactgctctt 350
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 taagaaatcaaatcatgggctggagagatggctcagtggttaagagcactgactgctctt 549
Query: 351 ccagaggtcctgagttcaattcccagcaaccacatggtggctcacaaccatttgtacatg 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ccagaggtcctgagttcaattcccagcaaccacatggtggctcacaaccatttgtacatg 609
Query: 411 ggatccgatg 420
||||||||||
Sbjct: 610 ggatccgatg 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 821
Length adjustment: 9
Effective length of query: 413
Effective length of database: 812
Effective search space: 335356
Effective search space used: 335356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
