Query= MSMg01no441_k01.b1 MSMg01no441_k01.b1 CHROMAT_FILE:
MSMg01no441_k01.b1 PHD_FILE: MSMg01no441_k01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:29 2005
(160 letters)
>mm_chr11_21024361_21024920
Length = 560
Score = 306 bits (158), Expect = 6e-88
Identities = 158/158 (100%)
Strand = Plus / Plus
Query: 1 tagaagatactttaatgtctctgtcactccagtgggctacatttgtacattagcaacctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagaagatactttaatgtctctgtcactccagtgggctacatttgtacattagcaacctg 260
Query: 61 ttggttaaaggctcaggacacttcatcttagagaaaagacatgggggctagagagaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggttaaaggctcaggacacttcatcttagagaaaagacatgggggctagagagaagtt 320
Query: 121 taatgtttaacattacaggcagttgacaatgttgctgt 158
||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatgtttaacattacaggcagttgacaatgttgctgt 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 160
Length of database: 560
Length adjustment: 8
Effective length of query: 152
Effective length of database: 552
Effective search space: 83904
Effective search space used: 83904
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no441_k01.g1 MSMg01no441_k01.g1 CHROMAT_FILE:
MSMg01no441_k01.g1 PHD_FILE: MSMg01no441_k01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:29 2005
(462 letters)
>mm_chr11_21202768_21203628
Length = 861
Score = 739 bits (382), Expect = 0.0
Identities = 434/456 (95%), Gaps = 10/456 (2%)
Strand = Plus / Minus
Query: 1 aggacagccagggccacacagagaaaccctgtctcaaaaaaactaacaaacaaaaaaaaa 60
||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 588 aggacaggcagggccacacagagaaaccctgtctcaaaaaaacaaaaaaacaaaaaaaaa 529
Query: 61 aaagaaagaaagaaagaataaacgaacgaaggaacgaactgtaatgactacacacttctc 120
||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 528 aaa-----aaagaaagaacaaacgaacgaaggaatgaactgtaatgactacacacttctc 474
Query: 121 tgagtatctggtttataccaacagtggcgctacatacagaacagtaaggaagatggcatt 180
||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 473 tgagtatctggtttatagcaacagtggtactacatacagaacagtaaggaagatggcatt 414
Query: 181 ttagctaaatgagctaaaggattatctaggtataggaggaaaaaaaggaagaaaatcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ttagctaaatgagctaaaggattatctaggtataggaggaaaaaaaggaagaaaatcttg 354
Query: 241 catgat--atttatacaattacagagaaactgtcaatctaattgtcaaagggacatattt 298
|||||| | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 catgataca---aaacaattacagagaaactgtcaatctaattgtcaaagggacatattt 297
Query: 299 aaaattaatagccttttttaaccaaaaagaccttaactagagaatgaagtaggaattcac 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 aaaattaatagccttttttaaccaaaaagaccttaactagagaatgaagtaggaattcac 237
Query: 359 aaagtggtagattattttgcaatatggttggagagcagacatgtgcttaaacaagccact 418
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 236 aaagtggtagatgattttgcaatatggttggagagcagacatgtgcttacacaagcaact 177
Query: 419 ccagcaaatcactaagaaaggaagagggagggaggg 454
||||||||||||||||||||||||||||||||||||
Sbjct: 176 ccagcaaatcactaagaaaggaagagggagggaggg 141
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 861
Length adjustment: 10
Effective length of query: 452
Effective length of database: 851
Effective search space: 384652
Effective search space used: 384652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
