Query= MSMg01no442_g11.b1 MSMg01no442_g11.b1 CHROMAT_FILE:
MSMg01no442_g11.b1 PHD_FILE: MSMg01no442_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:33 2005
(274 letters)
>mm_chr11_54410478_54411151
Length = 674
Score = 404 bits (209), Expect = e-117
Identities = 262/295 (88%), Gaps = 27/295 (9%)
Strand = Plus / Plus
Query: 6 gaattctaaatta-tctctattgtgctaataacaactataaaacagtctataaatccttg 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaattctaaattagt-tctattgtgctaataacaactataaaacagtctataaatccttg 239
Query: 65 tctcaatgtcatgtaatttagagaaagcctctgagatgggttgaaaagactcaatagtct 124
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 240 tctcaatgtcatgtgatttagagaaagcctctgagatgggttgaacagactcaatagtct 299
Query: 125 gcaact-----------------------ta--aaatgtacatatgaaatgcatacctta 159
|||||| || |||||||||||||||||||| ||||||
Sbjct: 300 gcaacttgaaatgtacatatgaatgtacatatgaaatgtacatatgaaatgcacacctta 359
Query: 160 gacacgatcatcacttagctgttgatatttttaaaattacttgtgcccatgcttaacttg 219
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gacacgctcatcactgagctgttgatatttttaaaattacttgtgcccatgcttaacttg 419
Query: 220 aggcattctgttgtttctttccttaaagggctagtatgtttagatatcgtgttca 274
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 420 aggcattctgttgtttctttccttaaagggctagtatgtttagacatcgtgttca 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no442_g11.g1 MSMg01no442_g11.g1 CHROMAT_FILE:
MSMg01no442_g11.g1 PHD_FILE: MSMg01no442_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:33 2005
(208 letters)
>mm_chr11_54614054_54614661
Length = 608
Score = 395 bits (204), Expect = e-114
Identities = 207/208 (99%)
Strand = Plus / Minus
Query: 1 ttcacaagttcaaggctatattatctggaaatctctcacgggctttttcgttgtcctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttcacaagttcaaggctatattatctggaaatctctcacgggctttttcgttgtcctgcc 321
Query: 61 tatacatatatgaatgtgacctattttttctacctgagtcaccgggagaaagattacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tatacatatatgaatgtgacctattttttctacctgagtcaccgggagaaagattacttt 261
Query: 121 gaatcatctttgaaggtctcttggggccttaggtttagctgaagtaccaaagagtattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaatcatctttgaaggtctcttggggccttaggtttagctgaagtaccaaagagtattta 201
Query: 181 tatgtatgtgatgtatgtatgtatgtat 208
|||||||| |||||||||||||||||||
Sbjct: 200 tatgtatgggatgtatgtatgtatgtat 173
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 208
Length of database: 608
Length adjustment: 9
Effective length of query: 199
Effective length of database: 599
Effective search space: 119201
Effective search space used: 119201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
