Query= MSMg01no444_h20.b1 MSMg01no444_h20.b1 CHROMAT_FILE:
MSMg01no444_h20.b1 PHD_FILE: MSMg01no444_h20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:24 2005
(442 letters)
>mm_chr11_7252351_7253193
Length = 843
Score = 607 bits (314), Expect = e-178
Identities = 335/342 (97%), Gaps = 2/342 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtgacaaatatttttaaaagtcccaaattagtggaaattcaaatgtcaaccct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtgacaaatatttttaaaagtcccaaattagtggaaattcaaatgtcaaccct 264
Query: 65 ttgtttggataacttaatagaggctttttttt-ctactcaaaatacttttcagatatttt 123
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 265 ttgtttggataacttaatagagactttttttttctactcaaaatacttttcagatatttt 324
Query: 124 tgaacaatttttttattagatattttcttcatttacaattcaaatgatatcccaaaagtt 183
| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 325 taaacaatttttt-attagatattttcttcatttacaattcaaatgctatcccaaaagtt 383
Query: 184 ccttatatcctctctccaccctgttctccaacccacccactcctgcttcctggccctggt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccttatatcctctctccaccctgttctccaacccacccactcctgcttcctggccctggt 443
Query: 244 attctcctgtattggggcataaaatctttgcaagaccaagagcctctcctcccaatgatg 303
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 444 attctcctgtattggggcataaaatctttgtaagaccaagagtctctcctcccaatgatg 503
Query: 304 gtcgattaggccatcttctgctacatatgcagctagagacac 345
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtcgattaggccatcttctgctacatatgcagctagagacac 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 843
Length adjustment: 9
Effective length of query: 433
Effective length of database: 834
Effective search space: 361122
Effective search space used: 361122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no444_h20.g1 MSMg01no444_h20.g1 CHROMAT_FILE:
MSMg01no444_h20.g1 PHD_FILE: MSMg01no444_h20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:24 2005
(546 letters)
>mm_chr11_7419031_7419978
Length = 948
Score = 988 bits (511), Expect = 0.0
Identities = 538/551 (97%), Gaps = 8/551 (1%)
Strand = Plus / Minus
Query: 1 actgtggcacactgggtcctgggtgtgtatggacttctgatgtttgggtacaaagttcaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 748 actgtggcacactgggtcctgggtgtgtatggacttctcatgtttgggtacaaagttcaa 689
Query: 61 aactttccacagttgataaacacttgtttgctttgaaagtttcacactgattcttttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aactttccacagttgataaacacttgtttgctttgaaagtttcacactgattcttttgga 629
Query: 121 cagtggaaaagaaatatttgggatttaggtttccttggaaataaatgacccagttgtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 cagtggaaaagaaatatttgggatttaggtttccttggaaataaatgacccagttgtttt 569
Query: 181 gtgattacaggctcagatgctcagctacatggccagtactgttctccatccaaagttctt 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gtgattacaggctcagacgctcagctacatggccagtactgttctccatccaaagttctt 509
Query: 241 cagcacttgaccatggccaaggtgctaccc-----ctgtctcccccacctccactataca 295
||||||||||||||||||||| || | | |||||||||||||||||||||||||
Sbjct: 508 cagcacttgaccatggccaagatggt---caagtgctgtctcccccacctccactataca 452
Query: 296 tgggcataagtgtcttctcctaggctgctgtgaggattagctatacatttcttataatgt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tgggcataagtgtcttctcctaggctgctgtgaggattagctatacatttcttataatgt 392
Query: 356 tccttgcaaagacagtgggctagaatagcttccatgttctgtaagagtccacaagggact 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tccttgcaaagacagtgggctagaatagcttccatgttctgtaagagtccacaagggact 332
Query: 416 cggggaataatcttctgtgctacccatgcaggaacccctgatcttcatgtaaacagtgcc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cggggaataatcttctgtgctacccatgcaggaacccctgatcttcatgtaaacagtgcc 272
Query: 476 tgtgggtaaatcacatgaaagaaggttctatggcaaacagtcgtagaaacagctaagaac 535
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 271 tgtgggtaaatcacatgaaagaaggttctatggcaaacagtcgtaaaaacagctaagaac 212
Query: 536 tgtcttgaaaa 546
|||||||||||
Sbjct: 211 tgtcttgaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 948
Length adjustment: 10
Effective length of query: 536
Effective length of database: 938
Effective search space: 502768
Effective search space used: 502768
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
