Query= MSMg01no445_l22.b1 MSMg01no445_l22.b1 CHROMAT_FILE:
MSMg01no445_l22.b1 PHD_FILE: MSMg01no445_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:03 2005
(236 letters)
>mm_chr11_63569134_63569770
Length = 637
Score = 383 bits (198), Expect = e-111
Identities = 225/240 (93%), Gaps = 11/240 (4%)
Strand = Plus / Plus
Query: 1 aaaaaaaagatcttcaaacttgagagggctgtatatatttatgctttgagggttaggttt 60
|||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||
Sbjct: 201 aaaaaaaagatcttcaaacttgagagggctgtatgtagctatgttttgagggttaggttt 260
Query: 61 ctgactgaagttctatttcaaatagatgtcactattagctaaattaggatgtacagtgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgactgaagttctatttcaaatagatgtcactattagctaaattaggatgtacagtgac 320
Query: 121 atcaccagccctatcctgtcctaatcatctggaaaagacttctcagag------tttttt 174
|||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 atcaccagccctatcctgtcctaatcatctggaaaagacttctcagagaacaaat----- 375
Query: 175 atttcagcagctactgggaaagtgggaccaagtcattttgttaaacaaattaagtacaga 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atttcagcagctactgggaaagtgggaccaagtcattttgttaaacaaattaagtacaga 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 637
Length adjustment: 9
Effective length of query: 227
Effective length of database: 628
Effective search space: 142556
Effective search space used: 142556
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no445_l22.g1 MSMg01no445_l22.g1 CHROMAT_FILE:
MSMg01no445_l22.g1 PHD_FILE: MSMg01no445_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:04 2005
(396 letters)
>mm_chr11_63738566_63739361
Length = 796
Score = 750 bits (388), Expect = 0.0
Identities = 394/396 (99%)
Strand = Plus / Minus
Query: 1 cttacccatcctccccatcctatgcttagcttctaggctgcggcgcctatagccttttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 cttacccatcctccccatcctatgcttagcttctaggctgcggcgcctatagccttttgg 537
Query: 61 ggaaacagagaggacactggcgcctgtgacgtccaggaggcgccagcagccttaggtgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ggaaacagagaggacactggcgcctgtgacgtccaggaggcgccagcagccttaggtgcc 477
Query: 121 gaatctaagccaaagttgaagcctctccgccccgctctgctgaaaccagattgccgcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gaatctaagccaaagttgaagcctctccgccccgctctgctgaaaccagattgccgcagc 417
Query: 181 caacagtccagcagcagcgcaggtcggagcgctccctggtgggcgggcagggtacccgcg 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 caacagtccagcagtagcgcaggtcggagcgctccctggtgggcgggcagggtacccgcg 357
Query: 241 gccgctctcacagccagtccctccagatccggctcgcagctgctcagttccaggggcggc 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gccgcgctcacagccagtccctccagatccggctcgcagctgctcagttccaggggcggc 297
Query: 301 agagctggcagcgggcaatgcagagggttccggtggcaggaactggggctctgggccacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agagctggcagcgggcaatgcagagggttccggtggcaggaactggggctctgggccacc 237
Query: 361 ggttcaggccgcccaggaaatgccttctctgccgtt 396
||||||||||||||||||||||||||||||||||||
Sbjct: 236 ggttcaggccgcccaggaaatgccttctctgccgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 796
Length adjustment: 9
Effective length of query: 387
Effective length of database: 787
Effective search space: 304569
Effective search space used: 304569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
