XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTC
TGAGGTTCTCGGTTGTAATCTACCTGAGGAAACACAGCTTTTCCAGAGAC
AAGGTTGTGAATTGGTCTTGTTCTGGGTTTAAACCATTCCCCATGGGTCT
TTTGAATTATCTTTTATTTTATCTCTGTTGTCAGGAACTCCTAAAGCCAC
AGTTTGCAGCTTGCCACTCATATCAGGAGCAAACTGGCCGATGAAATAAA
TATCTAACGATAAATATCTGATTATAGGAAAAAAATAATGACCTTTAATT
GTGATCACATATGTGTATCTTTAAGTTTTTTCTTTCACAGATCTTTTCTG
TGACTTACCTGGGACTTGTGTAAGTGTGCTTAAGTATTCTGAGTTTCTTT
TCTTTCTATTATTCCCATTTGACATCAATCCTTTATCTTTATCTTTATCT
TTATCTTTATCTTTATCTTTATCTTTATCTTTATCTTTATCTTTATCTTT
ATCTTTATCTTTATCTTTATCTTTATCTTTATCTATCTTTATCTTAAGGA
CAAAGCTTACCTACCTAAAATGATTTTCATCTCAAAGCACTACCCTTACT
TTTTGAATCTTTTGTATCAAAAATTTCCAAATCAATAACTTTTGTCTGTT
TTTTATTTGATATTTCCTTTTTTATTTTATTTGGCATTAGAGAGCATTTC
TTTATTTTTTAAGTTTTTTTTTAAGATT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXGATTCAGAAATTCAGCTTTAGCAAAGATTCCTGCTATTAATATGCTT
TTCCTGTTATTATTAAACATATATAACAATTACTAGGTATTAGCTCATCC
TTTTGAGCAGATCTCTGCAGTTCTATGAAGATGTACTGTCTTATAGTGAT
GCTATATAGACAAATAGATGACTTCTTAAGTCNNNTTAATGGATGGATNC
NNCTTTAAAGAAATTCCTAAAATTATNAACAGTGGATTTAATTTAAATCT
CCCCCCCCNNNNNTNTTTTTNNNNNNNNNNNNNNNNNNTTTTTNTTTTTT
TTTTCCTTTTNTCTTCTTCCCTTTCCCCCCCTCTTCTTCTTTTTCCTTTT
TCCCCCTTCTCCTTTTTTTCCCCTCTTTTTTTTCCCCTTTTTTCCTCTTC
CTTCCTTTCTCCCTTTCCCCTTTTCCTCTTTCCTCCTTTCCTTCCTTTCT
TTTTTCCCTTCTCTCCTTTCCCTTTCCTTTTTTCTCCCTTTTTTCCCACT
TTCCCCCTTTTCTTTTTTTCCCTTTTCTTCCTTTTCCTTTTCCTCCTTTT
TTTCCCCCTTCTACCTTTTCTTCCATATTATCACCTTTCCCCTTCCCTTA
CCCCTTTCTTATTCTCCTTTTTTCCCTCTCTTTTCCTCTTTTTTTTTTTC
TTTTTT

Query= MSMg01no446_a05.b1 MSMg01no446_a05.b1 CHROMAT_FILE:
MSMg01no446_a05.b1 PHD_FILE: MSMg01no446_a05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:25 2005
         (651 letters)



>mm_chr11_62613227_62614274
          Length = 1048

 Score =  915 bits (473), Expect = 0.0
 Identities = 568/651 (87%), Gaps = 79/651 (12%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgtaatctacctgaggaaacacagcttttccagagacaaggttgtgaattggtcttgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgtaatctacctgaggaaacacagcttttccagagacaaggttgtgaattggtcttgtt 260

                                                                       
Query: 61  ctgggtttaaaccattccccatgggtcttttgaattatcttttattttatctctgttgtc 120
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 ctgggtttaaaccattccccatgggtcttttgaattatcttttgttttatctctgttgtc 320

                                                                       
Query: 121 aggaactcctaaagccacagtttgcagcttgccactcatatcaggagcaaactggccgat 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 aggaactcctaaagccacagtttgcagcttgccactcatatcaggagcaaactggctgat 380

                                                                       
Query: 181 gaaataaatatctaacgataaatatctgattataggaaaaaaataatgacctttaattgt 240
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 gaaataaatatctaacgataaatatctgattataggaaaaaa-taatgacctttaattgt 439

                                                                       
Query: 241 gatcacatatgtgtatctttaagttttttctttcacagatcttttctgtgacttacctgg 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gatcacatatgtgcatctttaagttttttctttcacagatcttttctgtgacttacctgg 499

                                                                       
Query: 301 gacttgtgtaagtgtgcttaagtattctgagtttcttttctttctattattcccatttga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gacttgtgtaagtgtgcttaagtattctgagtttcttttctttctattattcccatttga 559

                                                                       
Query: 361 catcaatcctttatctttatctttatctttatctttatctttatctttatctttatcttt 420
           ||||||||||||||||||||||||||||||||||                          
Sbjct: 560 catcaatcctttatctttatctttatctttatct-------------------------- 593

                                                                       
Query: 421 atctttatctttatctttatctttatctttatctttatctttatctttatctatctttat 480
                                                               ||||||||
Sbjct: 594 ----------------------------------------------------atctttat 601

                                                                       
Query: 481 cttaaggacaaagcttacctacctaaaatgattttcatctcaaagcactacccttacttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cttaaggacaaagcttacctacctaaaatgattttcatctcaaagcactacccttacttt 661

                                                                       
Query: 541 ttgaatcttttgtatcaaaaatttccaaatcaataacttttgtctgttttttatttgata 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ttgaatcttttgtatcaaaaatttccaaatcaataacttttgtctgttttttatttgata 721

                                                              
Query: 601 tttccttttttattttatttggcattagagagcatttctttattttttaag 651
           ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 722 tttccttttttattttatttgtcattagagagcatttctttattttttaag 772


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1048
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1038
Effective search space:   665358
Effective search space used:   665358
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)