Query= MSMg01no446_b20.b1 MSMg01no446_b20.b1 CHROMAT_FILE:
MSMg01no446_b20.b1 PHD_FILE: MSMg01no446_b20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:33 2005
(490 letters)
>mm_chr11_5391610_5392499
Length = 890
Score = 903 bits (467), Expect = 0.0
Identities = 484/490 (98%)
Strand = Plus / Minus
Query: 1 taacagacaaccgtggcctttcctgcatttganactccttcctgtttggtctttatgtca 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 632 taacagacaaccgtggcctttcctgcatttgaaactccttcctgtttggtctttatgtca 573
Query: 61 atgccagctgtggggatttttctctttcaacctggcctctgacttttacttggttgataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 atgccagctgtggggatttttctctttcaacctggcctctgacttttacttggttgataa 513
Query: 121 gaaaataaacattgcaatcgtcatctgtcaatagcacagggagcagccttcaagccgggg 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 512 gaaaataaacattgcaatcgtcatctgtcaatagcaccgggagcagccttcaagccgggg 453
Query: 181 ccaggaggagccttgcatccaagatgaggggaggctttgactttacaaatggcttcttct 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 452 ccaggaggagccttgcatccaagatgaggggcggctttgactttacaaatggcttcttct 393
Query: 241 gggctggacagcctgttcgagttttcctggatttcaggggttttgtctcactctctcacc 300
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gggctggacagcctgggcgagttttcctggatttcaggggttttgtctcactctctcacc 333
Query: 301 taaatgtttcttctcctcttgtgtcgtctttatcagatagtaaaatcccagtaggccatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 taaatgtttcttctcctcttgtgtcgtctttatcagatagtaaaatcccagtaggccatg 273
Query: 361 agaagggaaaggtaggctgaaagcagggttgggcattccaggtgctgggcagggggcagt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agaagggaaaggtaggctgaaagcagggttgggcattccaggtgctgggcagggggcagg 213
Query: 421 gggaggcctgtatatgtatatgagttctcttcagacacaccagaagagggcatcacatcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gggaggcctgtatatgtatatgagttctcttcagacacaccagaagagggcatcacatcc 153
Query: 481 cattacagat 490
||||||||||
Sbjct: 152 cattacagat 143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no446_b20.g1 MSMg01no446_b20.g1 CHROMAT_FILE:
MSMg01no446_b20.g1 PHD_FILE: MSMg01no446_b20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:33 2005
(456 letters)
>mm_chr11_5194647_5195502
Length = 856
Score = 812 bits (420), Expect = 0.0
Identities = 447/456 (98%)
Strand = Plus / Plus
Query: 1 atggttctggaggcccaaggactgcttcccctgacttggcaccatctttctgcttcagat 60
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 201 atggttctggaggcccaaggactgcttcccctgacttggcacaaactttctgcttcagat 260
Query: 61 tgggtttctccaaacttctgcagctatttccagagcaggccagagtatattatctcagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggtttctccaaacttctgcagctatttccagagcaggccagagtatattatctcagac 320
Query: 121 acttgtgggccatttcttgagcaggacaatgtgggtgccatgggcctatgattcattcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttgtgggccatttcttgagcaggacaatgtgggtgccatgggcctatgattcattcaa 380
Query: 181 tccggagttttaagttgcttgtggtggtgcatatctgtcattctagcactcaggaggctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccggagttttaagttgcttgtggtggtgcatatctgtcattctagcactcaggaggctg 440
Query: 241 gggcagatttttttctgcaagtctgagtcagtcagaggtataaagagtttatgaatgcat 300
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggcagatgcatcactgcaagtctgagtcagtcagaggtataaagagtttatgaatgcat 500
Query: 301 ggtgagacactgtcttgaaaaatccaaagaaatgaaacctaataaaagcaattctttctt 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 ggtgagacactgtcttgaaaaatccaaagaaatgaaaccaaataaaagcaattctttctt 560
Query: 361 ccctacaacttgggctcctctctcaaggtagtgcatgctaactagtctgttgcttcaccc 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccctacaacgtgggctcctctctcaaggtagtgcatgctaactagtctgttgcttcaccc 620
Query: 421 ttacatttaactgcttaccaatccataacttccaaa 456
||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttacatttaactgcttaccaatccataacttccaaa 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
