Query= MSMg01no447_g14.b1 MSMg01no447_g14.b1 CHROMAT_FILE:
MSMg01no447_g14.b1 PHD_FILE: MSMg01no447_g14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:18 2005
(584 letters)
>mm_chr11_68462822_68463805
Length = 984
Score = 977 bits (505), Expect = 0.0
Identities = 556/591 (94%), Gaps = 30/591 (5%)
Strand = Plus / Minus
Query: 4 ggaattcttcaagtctcaaggagttttccagataactgaagtttatcttgacaaaaagca 63
||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 970 ggaattcttcaagactaaaggagctttccagataactgaagtttatcttgacaaaaagca 911
Query: 64 actcttgcttattttatccattttgattgcaatgtgtcaaaaatgttacattccagtgct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 actcttgcttattttatccattttgattgcaatgtgtcaaaaatgttacattccagtgct 851
Query: 124 gtgccggttttttgttttgtttag------------ttttttttttttttttgtcttctt 171
|||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 850 gtgccgtttttttgttttgtttagttttttttttttttttttttttttttttgtcttctt 791
Query: 172 tgtcttcaagctaccagatggttggctaaggctatgaagaacagaacagatttgtcttca 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 tgtcttcaagctaccagatggttggctaaggctatgaagaacagaacagatttgtcttca 731
Query: 232 gccccctcccatcttctattcactgtaaggatgtgtttaaaaacaaagagagagagagag 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gccccctcccatcttctattcactgtaaggatgtgtttaaaaacaaagagagagagagag 671
Query: 292 agagagagagagagagagagagagactacaatgcagaagctagaaaaaccaagtagctga 351
| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 a-----------------a-agagactacaatgcagaagctagaaaaaccaagtagctga 629
Query: 352 ctaaggaattattagaggttgggaacggctagaggagtattaaaagagacactggatata 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ctaaggaattattagaggttgggaacggctagaggagtattaaaagagacactggatata 569
Query: 412 atcagtgtacactgtatgcatgtattacactgaaccccattcatattcataatttttgag 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 atcagtgtacactgtatgcatgtattacactgaaccccattcatattcataatttttgag 509
Query: 472 acaggatctcaggtcagtcctagattccatcctcctgccttagtctcctaagtccctagc 531
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 508 acaggatctcaggtcagtcctagattccatcctcctgccttagcctcctaagtccctagc 449
Query: 532 ttctctaaataaataaattaaaagataaataaatgaataaataaataaata 582
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ttctctaaataaataaattaaaagataaataaatgaataaataaataaata 398
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_g14.g1 MSMg01no447_g14.g1 CHROMAT_FILE:
MSMg01no447_g14.g1 PHD_FILE: MSMg01no447_g14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:18 2005
(467 letters)
>mm_chr11_68284534_68285401
Length = 868
Score = 866 bits (448), Expect = 0.0
Identities = 463/468 (98%), Gaps = 1/468 (0%)
Strand = Plus / Plus
Query: 1 agggtgaagcagggattaaacaccttttgccgaaagggatacctaggaagggaagctcat 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 agggtgaagcagggattaaacaccctttgccgaaagggatacctaggaagggaagctcat 260
Query: 61 tggctaaacactcgggagtgtatctagatccctcgttagcatggagaaccccaggttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggctaaacactcgggagtgtatctagatccctcgttagcatggagaaccccaggttttt 320
Query: 121 atgctacctggctagttgtcgtggtcctctcaataggatgtcacagttacgtggtccatc 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgctacctgactagttgtcgtggtcctctcaataggatgtcacagttacgtggtccatc 380
Query: 181 caagagaggtagactctggctggaagccggttccaacacctgccgttctcgattacgaga 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 caagagaggtagactctggctggaagccggttccaacacctgctgttctcgattacgaga 440
Query: 241 attctagggagttgggaggtgaacctgtatcaatcttaccaggtcttctgtctggtggta 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 attctagggagttgggaggtgaacctgtatcaatcttaccaggtctactgtctggtggta 500
Query: 301 tggtctacttgcccacaaaggaccagctggggtgacttcccatctccctcaagaacttgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggtctacttgcccacaaaggaccagctggggtgacttcccatctccctcaagaacttgg 560
Query: 361 cctaggattgatggaggagcagctatgaggacaaaggctagattttgtctctaaagttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctaggattgatggaggagcagctatgaggacaaaggctagattttgtctctaaagttgt 620
Query: 421 ctatag-gaggctttcactgttccagcggcaggtgccgtcagctccag 467
|||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctatagagaggctttcactgttccagcggcaggtgccgtcagctccag 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 868
Length adjustment: 10
Effective length of query: 457
Effective length of database: 858
Effective search space: 392106
Effective search space used: 392106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
