Query= MSMg01no447_k05.b1 MSMg01no447_k05.b1 CHROMAT_FILE:
MSMg01no447_k05.b1 PHD_FILE: MSMg01no447_k05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:36 2005
(330 letters)
>mm_chr11_86991609_86992337
Length = 729
Score = 536 bits (277), Expect = e-157
Identities = 314/329 (95%), Gaps = 7/329 (2%)
Strand = Plus / Plus
Query: 5 gaattccagaatagcc---tcccctactacacacagaaaccctgtcttgggagacaaggg 61
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagaatagccaggtc---tactacacacagaaaccctgtcttgggagacaaggg 261
Query: 62 ggaaaaaaaaagaacaaaagaaatcacagtgagagggatgctctgtaccaacaagagtac 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggaaaaaaaaagaacaaaagaaatcacagtgagagggatgctctgtaccaacaagagtac 321
Query: 122 taattaaattgccttcagcctgtgcatagagcatgcaacctaaatctgagtactgagggt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 taattaaattgccttcagcctgtgcatagagcatgcaacctaaatctgagtactgagggt 381
Query: 182 gtctaagaataaatagtgagggcattatttatagggcactatggaggggtgtttgttttg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtctaagaataaatagtgagggcattatttatagggcactatggaggggtgtttgttttg 441
Query: 242 tattttgttttgttttttctctctatttgccagtgtaatatttttttgactgacttttca 301
| ||||||||| ||||| ||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 442 tgttttgtttt-tttttcctctctatttgacagtgtaatatttcaatgactgacttttca 500
Query: 302 agcttacttttactgaatatgttttagtt 330
||||||||||||| |||||| ||||||||
Sbjct: 501 agcttacttttacagaatatattttagtt 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 729
Length adjustment: 9
Effective length of query: 321
Effective length of database: 720
Effective search space: 231120
Effective search space used: 231120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_k05.g1 MSMg01no447_k05.g1 CHROMAT_FILE:
MSMg01no447_k05.g1 PHD_FILE: MSMg01no447_k05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:36 2005
(242 letters)
>mm_chr11_87135553_87136194
Length = 642
Score = 445 bits (230), Expect = e-129
Identities = 239/242 (98%)
Strand = Plus / Minus
Query: 1 ttggtcccaaacaggaagaccacagttggtttgttgtggttgttttaaagaatttgcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttggtcccaaacaggaagaccacagttggtttgttgtggttgttttaaagaatttgcctt 383
Query: 61 atttcttaaatggcgggtatatgtgtgggtatgtgcacatgagtggaggtgtccaggaag 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 382 atttcttaaatggcgggtatatgtgtgggtatatgcacatgagtggaggtgtccaggaag 323
Query: 121 taggaattacaagagactgtgaaccgcatgggtcttgagaactcaggagtcgccttttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 taggaattacaagagactgtgaaccgcatgggtcttgagaactcaggagtcgccttttca 263
Query: 181 gccatattgtgtttttctttttctttctggatagggtttatactgagtcacaggctggcc 240
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 262 gccatattgtgtttttctttttctttctggatagggttcatactgtgtcacaggctggcc 203
Query: 241 tg 242
||
Sbjct: 202 tg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
