Query= MSMg01no448_p17.b1 MSMg01no448_p17.b1 CHROMAT_FILE:
MSMg01no448_p17.b1 PHD_FILE: MSMg01no448_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:27 2005
(419 letters)
>mm_chr11_32885969_32886788
Length = 820
Score = 679 bits (351), Expect = 0.0
Identities = 391/407 (96%), Gaps = 8/407 (1%)
Strand = Plus / Minus
Query: 14 gaattccctaatgtattttcaaatcagacttgtaagtcacttggttgtttctctatcttg 73
||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 692 gaattccctaatgtacttt-aaatcagacctgtaagtcacttggttgtttctctatcttg 634
Query: 74 gtaatgggagaccccagcatgctggacttctgcagaataaaacactctttgcatttacat 133
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 633 gtaatgggagaccccagcatgctggacttctgcagaataaaacactc--tgcatttacat 576
Query: 134 actaggtgagtctatcattctttagacaatcatggacccttatagtttgagaaatgttat 193
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 575 actaggtgagtctatcattctttagacaatcatggacccttatagtttgagcaatgttat 516
Query: 194 atcatcagcacagatccacttgccatcagatcattgcctttcagtttcctgcaggcaaca 253
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 atcataagcacagatccacttgccatcagatcattgcctttcagtttcctgcaggcaaca 456
Query: 254 cagccaggcttctttgcactcagctgaaggttgtcctgccctcttcaggctgcccctggc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cagccaggcttctttgcactcagctgaaggttgtcctgccctcttcaggctgcccctggc 396
Query: 314 taggta-ccctggcgcaagtctctctctctctctctctctctctctctctctctctctct 372
|||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 395 taggtacccctggcgcaa----ctctctctctctctctctctctctctctctctctctct 340
Query: 373 ctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgta 419
|||||| | | | ||||||||||||||||||||||||||||||||||
Sbjct: 339 ctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgta 293
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 88
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 820
Length adjustment: 9
Effective length of query: 410
Effective length of database: 811
Effective search space: 332510
Effective search space used: 332510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_p17.g1 MSMg01no448_p17.g1 CHROMAT_FILE:
MSMg01no448_p17.g1 PHD_FILE: MSMg01no448_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:27 2005
(478 letters)
>mm_chr11_32737967_32738844
Length = 878
Score = 862 bits (446), Expect = 0.0
Identities = 470/478 (98%)
Strand = Plus / Plus
Query: 1 caaggttctcaaagcaagaggaacaggccattcaaggagaagcatgtgagagcctagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaggttctcaaagcaagaggaacaggccattcaaggagaagcatgtgagagcctagcca 260
Query: 61 aggggaaggggttggggctcagccctggcgctgggtgatgaagctgcatgctttccacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggggaaggggttggggctcagccctggcgctgggtgatgaagctgcatgctttccacca 320
Query: 121 tttctgccaatcgccgtccctctctgaacctgcacatgtgtggctgtgggtaaagaagat 180
||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 tttctaccaatcgcagtccctctctgaacctgcacatgcgtggctgtgggtaaagaagat 380
Query: 181 ggactagagcccatgcaagatggacctgcagaccccatccaggagctacaagtgtatggc 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 ggactagagcccatgcaagatggacctgcagaccccatgcaggagctacaagtgtatggc 440
Query: 241 cttctgatgacataggagagaactctgtatttgtcaagtgaatgtggccaagggtggacg 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttctgaggacataggagagaactctgtatttgtcaagtgaatgtggccaagggtggacg 500
Query: 301 tctggcttggccacaagccccttgaggttgaaatgacttcaattcaagataaaatcaccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctggcttggccacaagccccttgaggttgaaatgacttcaattcaagataaaatcaccc 560
Query: 361 atgtctggtacatttctgaacccactcatctgccccacattattgtctctcatgtctact 420
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 561 atgtctggtacatttctgaacccactcatctgccccacagtattgtctctcatgtccact 620
Query: 421 tcctcacggtctataaggctgtcaggggtctcctgaggaagtctgcatttgtgctgac 478
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcctcacgggctataaggctgtcaggggtctcctgaggaagtctgcatttgtgctgac 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
