Query= MSMg01no451_b02.b1 MSMg01no451_b02.b1 CHROMAT_FILE:
MSMg01no451_b02.b1 PHD_FILE: MSMg01no451_b02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:11 2005
(666 letters)
>mm_chr11_17259772_17260837
Length = 1066
Score = 1065 bits (551), Expect = 0.0
Identities = 557/559 (99%)
Strand = Plus / Minus
Query: 105 caataactccagaattaaagcaaaactccatctcaaaaggaattagatagtgatagagca 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 caataactccagaattaaagcaaaactccatctcaaaaggaattagatagtgatagagca 1007
Query: 165 agacagctgacatccttttcaggcctctgcacatgtacaggggtgcacacacctgcatgc 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 agacagctgacatccttttcaggcctctgcacatgtacaggggtgcacacacctgcatgc 947
Query: 225 ttgtgtgcatatatcacccatacctactccacttacatacacaaacaaaaatacgtaaat 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 ttgtgtgcatatatcacccatacctactccacttacatacacaaacaaaaatacgtaaat 887
Query: 285 tttaaaatcgtaagttgtttgtgacacttgctaaagacttaacagggttcttattgaagg 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 tttaaaatcgtaagttgtttgtgacacttgctaaagacttaacagggttcttattgaagg 827
Query: 345 aagacattaactaggagagaggtgggataaggcatttgttcggctattcatggctgatta 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 aagacattaactaggagagaggtgggataaggcatttgttcggctattcatggctgatta 767
Query: 405 gacaaaaggaatgtatgtacaggctaaagtaagctaaaaggattctccatgaaatttggt 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gacaaaaggaatgtatgtacaggctaaagtaagctaaaaggattctccatgaaatttggt 707
Query: 465 gaaacagtgaatcacagagctccaaatgataaggcatactcaggaagaaaaaaaacacag 524
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 706 gaaacagtgaatcacagagctccaaatgacaaggcatactcaggaagaaaaaaaacatag 647
Query: 525 gagcctaaagaagataggtcaaatgacaatctttgtcattcctaggatccaggaggggcc 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gagcctaaagaagataggtcaaatgacaatctttgtcattcctaggatccaggaggggcc 587
Query: 585 agatgcccttttactctttgactgtatgtgtaagcattctctctctctctctctctctct 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 agatgcccttttactctttgactgtatgtgtaagcattctctctctctctctctctctct 527
Query: 645 ctctctctctctctctctc 663
|||||||||||||||||||
Sbjct: 526 ctctctctctctctctctc 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_b02.g1 MSMg01no451_b02.g1 CHROMAT_FILE:
MSMg01no451_b02.g1 PHD_FILE: MSMg01no451_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:11 2005
(567 letters)
>mm_chr11_17218108_17219074
Length = 967
Score = 1025 bits (530), Expect = 0.0
Identities = 560/572 (97%), Gaps = 6/572 (1%)
Strand = Plus / Plus
Query: 1 aggggatgaaaatgggatattgactttgggagagctctttcaggtagatattttgagtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggggatgaaaatgggatattgactttgggagagctctttcaggtagatattttgagtca 260
Query: 61 ggagccaagaaataactaagttctaattgtctat-gccatggccttgactaggatttaaa 119
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 ggagccaagaaataactaagttctaattgtctacagccatggccttgactaggatttaaa 320
Query: 120 aaaaatagcatatatatgtgctgtctacatttaattgctttgttgtcagtgcttgttatg 179
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 aaaa-tagcatatatatgtgctgtctacatttaattgctttgttgtcagtgcttgttaag 379
Query: 180 aaacaggatcatgtatacttggctggctatgtggatcatatagcttgaacatacagattt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaacaggatcatgtatacttggctggctatgtggatcatatagcttgaacatacagattt 439
Query: 240 acctaccattatctctgcctctagaatgctggaattaaaggtgtgtgccatgtccagcct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acctaccattatctctgcctctagaatgctggaattaaaggtgtgtgccatgtccagcct 499
Query: 300 cgaaacacatttcatcctctttaggttatatctcaatgataactggatacaacttagtat 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgaaacacatttcatcctctttaggttatatctcaatgataactggatacaacttagtat 559
Query: 360 cattttgactttatcccttattctagacaccaccaggaacaaccagttaggcataggttt 419
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 560 cattttgactttatcccttattctagacaccaccagaaacaaccacttaggcataggttt 619
Query: 420 tacgagcttcataggttcataggagatataccttcttcattgctgcagtatgggtgtcct 479
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 620 tacgagcttcataggttcataggagatataccttcctcattgctgcagtatgggtgtcct 679
Query: 480 agttagctttctattcctgtgataaaaactatactgaaggcaactttggggccgggggg- 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agttagctttctattcctgtgataaaaactatactgaaggcaactttggggccggggggg 739
Query: 539 ---agtttatatgtcttattaaacatcccaga 567
|||||||||||||||||||||||||||||
Sbjct: 740 gggagtttatatgtcttattaaacatcccaga 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
